RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 H0YC42 278 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 RNASET2O00584 256 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 SEC14L5O43304 696 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 EIF4E2O60573 245 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 AQP8O94778 261 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 NTN1O95631 604 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 PSMB1P20618 241 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 ATP6V1C1P21283 382 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 CCKARP32238 428 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 CPOXP36551 454 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 P2RX1P51575 399 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 ATP12AP54707 1039 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 TPD52P55327 224 aaPredicted RBP12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 VSNL1P62760 191 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 FOXD4Q12950 439 aaPredicted RBP12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 LASP1Q14847 261 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 RNPS1Q15287 305 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 BEND4Q6ZU67 534 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 BIVMQ86UB2 503 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 CXorf67Q86X51 503 aaPredicted RBP12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 OR8J2Q8NGG1 315 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 OR10D3Q8NH80 312 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 OR2V1Q8NHB1 315 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 CLHC1Q8NHS4 586 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 MIPOL1Q8TD10 442 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 ADAMTS15Q8TE58 950 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 CPNE4Q96A23 557 aaPredicted RBP12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 MRGPRX4Q96LA9 322 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 MED18Q9BUE0 208 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 MECRQ9BV79 373 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 HDHD5Q9BXW7 423 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 NOP53Q9NZM5 478 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 ZDHHC2Q9UIJ5 367 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 VDAC3Q9Y277 283 aa12.99□□□□□ -0.33
SMARCE1-216ENST00000580419 CADP27708 2225 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 ZANQ9Y493 2812 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 EIF1AYO14602 144 aaKnown RBP12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 TM9SF1O15321 606 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 ARHGEF9O43307 516 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 PEX11AO75192 247 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 SYNGR4O95473 234 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 AGR2O95994 175 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 TUBBP07437 444 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 PAX1P15863 534 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 ARRB2P32121 409 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 EIF1AXP47813 144 aaKnown RBP12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 RFX3P48380 749 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 NR1H2P55055 460 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 CTBP2P56545 445 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 TP53BP2Q13625 1128 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 PTGR1Q14914 329 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 DPY19L1Q2PZI1 675 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 IL23RQ5VWK5 629 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 FIGNL1Q6PIW4 674 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 PLXDC2Q6UX71 529 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 ZAR1Q86SH2 424 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 CROCCP2Q86T23 111 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 STK32CQ86UX6 486 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 SLC43A2Q8N370 569 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 ZNF610Q8N9Z0 462 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 FNDC5Q8NAU1 212 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 OR7A2PQ8NGA2 310 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 OR2W6PQ8NHA6 318 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 RNF128Q8TEB7 428 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 C16orf58Q96GQ5 468 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 C3orf30Q96M34 536 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 KLHL15Q96M94 604 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 OPN3Q9H1Y3 402 aaPredicted RBP12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 POLE3Q9NRF9 147 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 GPR52Q9Y2T5 361 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 FIS1Q9Y3D6 152 aa12.98□□□□□ -0.33
SMARCE1-216ENST00000580419 CSPG4Q6UVK1 2322 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 FAM171A2A8MVW0 826 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 SIAH2O43255 324 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 SLU7O95391 586 aaKnown RBP12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 SERPINE1P05121 402 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 MYZAPP0CAP1 466 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 DHRS4L1P0CG22 281 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 FKBP2P26885 142 aaKnown RBP12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 LOXP28300 417 aaPredicted RBP12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 CARD18P57730 90 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 TXNL4AP83876 142 aaKnown RBP12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 CD226Q15762 336 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 ZNF141Q15928 474 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 TNFAIP8L3Q5GJ75 292 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 BEX5Q5H9J7 111 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 DCST2Q5T1A1 773 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 SZRD1Q7Z422 152 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 NUDCD3Q8IVD9 361 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 LILRA2Q8N149 483 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 OR5M1Q8NGP8 315 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 POC1BQ8TC44 478 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 IGFBPL1Q8WX77 278 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 CDS1Q92903 461 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 ARL8AQ96BM9 186 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 TESCQ96BS2 214 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 TUBGCP3Q96CW5 907 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 RNF145Q96MT1 663 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 DUSP26Q9BV47 211 aa12.97□□□□□ -0.33
SMARCE1-216ENST00000580419 PRRG4Q9BZD6 226 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms