RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 TEX37Q96LM6 180 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 ZNF300Q96RE9 604 aaPredicted RBP3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 BBS4Q96RK4 519 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 SORT1Q99523 831 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 BHLHE41Q9C0J9 482 aaPredicted RBP3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 QRSL1Q9H0R6 528 aaKnown RBP3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 UBTD1Q9HAC8 227 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 LRTM1Q9HBL6 345 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 SLC6A13Q9NSD5 602 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 ACSS1Q9NUB1 689 aaPredicted RBP3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 DDX18Q9NVP1 670 aaKnown RBP3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 C1orf109Q9NX04 203 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 MKS1Q9NXB0 559 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 GIN1Q9NXP7 522 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 ELOVL5Q9NYP7 299 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 PSMC3IPQ9P2W1 217 aaPredicted RBP3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 DCDC2Q9UHG0 476 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 PRSS50Q9UI38 385 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 GDF2Q9UK05 429 aaPredicted RBP3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 OR10H1Q9Y4A9 318 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 CHST2Q9Y4C5 530 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 MALRD1Q5VYJ5 2156 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 CHD3Q12873 2000 aaKnown RBP3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 IGHV3-15A0A0B4J1V0 119 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 A0A1W2PNR3 127 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 SMIM23A6NLE4 172 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 ZNF716A6NP11 495 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 C9JVG2 144 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 PDLIM1O00151 329 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 ZNF195O14628 629 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 HS3ST1O14792 307 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 SMAD7O15105 426 aaKnown RBP3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 SCAMP2O15127 329 aaKnown RBP3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 PDPK1O15530 556 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 GPRIN2O60269 458 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 COQ9O75208 318 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 GLRA3O75311 464 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 SPAG7O75391 227 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 UGT2B17O75795 530 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 SLITRK5O94991 958 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 CNOT4O95628 575 aaKnown RBP3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 C6orf47O95873 294 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 IGHV4-39P01824 125 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 TUBBP07437 444 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 IGFBP1P08833 259 aaPredicted RBP3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 DHRS4L1P0CG22 281 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 MYL2P10916 166 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 G6PDP11413 515 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 ZNF17P17021 662 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 KRT4P19013 534 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 TAC1P20366 129 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 COX5AP20674 150 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 PCSK6P29122 969 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 IL12AP29459 219 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 GSTM5P46439 218 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 EIF1AXP47813 144 aaKnown RBP3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 CPA2P48052 419 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 MVDP53602 400 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 PRKAG1P54619 331 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 CASP9P55211 416 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 C21orf58P58505 322 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 VSNL1P62760 191 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 PPP2R2AP63151 447 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 RPL38P63173 70 aaKnown RBP3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 HBA1P69905 142 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 LASP1Q14847 261 aaKnown RBP3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 TAB1Q15750 504 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 EXOC3L2Q2M3D2 409 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 TNFAIP8L3Q5GJ75 292 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 NCMAPQ5T1S8 102 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 OR2A2Q6IF42 318 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 C11orf71Q6IPW1 123 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 HEPHL1Q6MZM0 1159 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 ADAM5Q6NVV9 412 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 CDC73Q6P1J9 531 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 DNAJC14Q6Y2X3 702 aaPredicted RBP3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 HMGN2P46Q86SG4 172 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 COMTD1Q86VU5 262 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 WDFY1Q8IWB7 410 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 TUSC5Q8IXB3 177 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 SAMD14Q8IZD0 417 aaPredicted RBP3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 ZNF619Q8N2I2 560 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 MEIOBQ8N635 442 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 ZNF611Q8N823 705 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 ZIC4Q8N9L1 334 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 CDRT4Q8N9R6 151 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 KBTBD8Q8NFY9 601 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 OR5D16Q8NGK9 328 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 OR6K3Q8NGY3 331 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 OR5AK3PQ8NH89 298 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 FBXO27Q8NI29 283 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 PIWIL2Q8TC59 973 aaKnown RBP3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 GPR151Q8TDV0 419 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 AENQ8WTP8 325 aaKnown RBP3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 TWIST2Q8WVJ9 160 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 OSTF1Q92882 214 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 ZNF775Q96BV0 537 aaPredicted RBP3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 ZBTB9Q96C00 473 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 PLPPR2Q96GM1 343 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 GMPPAQ96IJ6 420 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms