RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 ANXA8L1Q5VT79 327 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 BLOC1S3Q6QNY0 202 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 RETREG3Q86VR2 466 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 COMTD1Q86VU5 262 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 RNF130Q86XS8 419 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 GTPBP8Q8N3Z3 284 aaPredicted RBP7.82□□□□□ -1.16
SMG6-216ENST00000575176 METTL25Q8N6Q8 603 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 ANKFN1Q8N957 763 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 OR14L1PQ8NHC6 308 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 OR52E6Q96RD3 313 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 PRPF18Q99633 342 aaKnown RBP7.82□□□□□ -1.16
SMG6-216ENST00000575176 QRSL1Q9H0R6 528 aaKnown RBP7.82□□□□□ -1.16
SMG6-216ENST00000575176 CCDC134Q9H6E4 229 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 LDAHQ9H6V9 325 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 COQ10BQ9H8M1 238 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 SLAMF8Q9P0V8 285 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 ACAD8Q9UKU7 415 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 RPH3AQ9Y2J0 694 aaPredicted RBP7.82□□□□□ -1.16
SMG6-216ENST00000575176 SPG11Q96JI7 2443 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 FAM234BA2RU67 622 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 CCDC154A6NI56 674 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 CLDN24A6NM45 220 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 FAM90A27PA6NNH2 459 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 AHRRA9YTQ3 701 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 CFLARO15519 480 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 CPSF4O95639 269 aaKnown RBP7.81□□□□□ -1.16
SMG6-216ENST00000575176 AK1P00568 194 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 KRT16P08779 473 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 HOXD4P09016 255 aaPredicted RBP7.81□□□□□ -1.16
SMG6-216ENST00000575176 NUDT7P0C024 238 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 OR12D1P0DN82 309 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 ESRRAP11474 423 aaPredicted RBP7.81□□□□□ -1.16
SMG6-216ENST00000575176 PRKCAP17252 672 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 MATN1P21941 496 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 CCKARP32238 428 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 OPRM1P35372 400 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 KHKP50053 298 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 POLR2JP52435 117 aaKnown RBP7.81□□□□□ -1.16
SMG6-216ENST00000575176 SMSP52788 366 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 C17orf67Q0P5P2 114 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 BCL2A1Q16548 175 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 SPDYE7PQ495Y7 208 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 FLYWCH1Q4VC44 716 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 SLC2A7Q6PXP3 512 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 ACAD11Q709F0 780 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 HMGN2P46Q86SG4 172 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 PM20D2Q8IYS1 436 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 OR4K17Q8NGC6 315 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 PNPT1Q8TCS8 783 aaKnown RBP7.81□□□□□ -1.16
SMG6-216ENST00000575176 GPR119Q8TDV5 335 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 ADAMTS15Q8TE58 950 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 FIG4Q92562 907 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 RND1Q92730 232 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 ROPN1LQ96C74 230 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 SH3YL1Q96HL8 342 aaPredicted RBP7.81□□□□□ -1.16
SMG6-216ENST00000575176 ZNF845Q96IR2 970 aaPredicted RBP7.81□□□□□ -1.16
SMG6-216ENST00000575176 RNF145Q96MT1 663 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 SFXN2Q96NB2 322 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 PANX1Q96RD7 426 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 TBL1XR1Q9BZK7 514 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 CALHM2Q9HA72 323 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 DKKL1Q9UK85 242 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 MRTO4Q9UKD2 239 aaKnown RBP7.81□□□□□ -1.16
SMG6-216ENST00000575176 MKLN1Q9UL63 735 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 CAMK2AQ9UQM7 478 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 VDAC3Q9Y277 283 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 DTNAQ9Y4J8 743 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 ITPR3Q14573 2671 aa7.81□□□□□ -1.16
SMG6-216ENST00000575176 TEP1Q99973 2627 aaKnown RBP7.8□□□□□ -1.16
SMG6-216ENST00000575176 UQCRHLA0A096LP55 91 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 SERINC4A6NH21 518 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 FXYD1O00168 92 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 ADAMDEC1O15204 470 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 POLR3GO15318 223 aaPredicted RBP7.8□□□□□ -1.16
SMG6-216ENST00000575176 NDUFB5O43674 189 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 GMFGO60234 142 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 H6PDO95479 791 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 IL6P05231 212 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 TFPTP0C1Z6 253 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 ETFAP13804 333 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 HK1P19367 917 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 KLK2P20151 261 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 SLC6A8P48029 635 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 SUMO3P55854 103 aaPredicted RBP7.8□□□□□ -1.16
SMG6-216ENST00000575176 KRTAP10-9P60411 292 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 CHRNEQ04844 493 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 RAET1LQ5VY80 246 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 SP5Q6BEB4 398 aaPredicted RBP7.8□□□□□ -1.16
SMG6-216ENST00000575176 NXNQ6DKJ4 435 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 TMEM211Q6ICI0 200 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 DLEU7Q6UYE1 221 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 MTERF4Q7Z6M4 381 aaKnown RBP7.8□□□□□ -1.16
SMG6-216ENST00000575176 MISPQ8IVT2 679 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 DMRTC2Q8IXT2 367 aaPredicted RBP7.8□□□□□ -1.16
SMG6-216ENST00000575176 EID3Q8N140 333 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 MIER2Q8N344 545 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 B4GALNT2Q8NHY0 566 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 ASB5Q8WWX0 329 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 OIT3Q8WWZ8 545 aa7.8□□□□□ -1.16
SMG6-216ENST00000575176 MARVELD3Q96A59 401 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms