RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 PDSS1Q5T2R2 415 aa13.59□□□□□ -0.23
CTNS-209ENST00000574776 GTF2IRD2BQ6EKJ0 949 aa13.59□□□□□ -0.23
CTNS-209ENST00000574776 ALKBH2Q6NS38 261 aa13.59□□□□□ -0.23
CTNS-209ENST00000574776 R3HCC1LQ7Z5L2 792 aaKnown RBP13.59□□□□□ -0.23
CTNS-209ENST00000574776 GTF2IRD2Q86UP8 949 aa13.59□□□□□ -0.23
CTNS-209ENST00000574776 TRABD2AQ86V40 505 aa13.59□□□□□ -0.23
CTNS-209ENST00000574776 OR7A2PQ8NGA2 310 aa13.59□□□□□ -0.23
CTNS-209ENST00000574776 PHOSPHO1Q8TCT1 267 aa13.59□□□□□ -0.23
CTNS-209ENST00000574776 NUDT8Q8WV74 236 aa13.59□□□□□ -0.23
CTNS-209ENST00000574776 CDS1Q92903 461 aa13.59□□□□□ -0.23
CTNS-209ENST00000574776 PLPPR2Q96GM1 343 aa13.59□□□□□ -0.23
CTNS-209ENST00000574776 ACTR6Q9GZN1 396 aa13.59□□□□□ -0.23
CTNS-209ENST00000574776 PPCSQ9HAB8 311 aa13.59□□□□□ -0.23
CTNS-209ENST00000574776 FANCFQ9NPI8 374 aa13.59□□□□□ -0.23
CTNS-209ENST00000574776 ZCCHC3Q9NUD5 404 aaKnown RBP13.59□□□□□ -0.23
CTNS-209ENST00000574776 GIN1Q9NXP7 522 aa13.59□□□□□ -0.23
CTNS-209ENST00000574776 ATP6V1HQ9UI12 483 aa13.59□□□□□ -0.23
CTNS-209ENST00000574776 MID2Q9UJV3 735 aa13.59□□□□□ -0.23
CTNS-209ENST00000574776 GPR52Q9Y2T5 361 aa13.59□□□□□ -0.23
CTNS-209ENST00000574776 SNX8Q9Y5X2 465 aa13.59□□□□□ -0.23
CTNS-209ENST00000574776 ZANQ9Y493 2812 aa13.59□□□□□ -0.23
CTNS-209ENST00000574776 NPIPA5A0A0B4J1W7 369 aa13.58□□□□□ -0.24
CTNS-209ENST00000574776 A0A1W2PQD3 144 aa13.58□□□□□ -0.24
CTNS-209ENST00000574776 TLDC2A0PJX2 215 aa13.58□□□□□ -0.24
CTNS-209ENST00000574776 NPIPA7E9PJI5 369 aa13.58□□□□□ -0.24
CTNS-209ENST00000574776 PIP5K1BO14986 540 aa13.58□□□□□ -0.24
CTNS-209ENST00000574776 OIP5O43482 229 aa13.58□□□□□ -0.24
CTNS-209ENST00000574776 NTN1O95631 604 aa13.58□□□□□ -0.24
CTNS-209ENST00000574776 TUBBP07437 444 aa13.58□□□□□ -0.24
CTNS-209ENST00000574776 NPIPA8P0DM63 369 aa13.58□□□□□ -0.24
CTNS-209ENST00000574776 LAMP1P11279 417 aa13.58□□□□□ -0.24
CTNS-209ENST00000574776 ALDH3A1P30838 453 aa13.58□□□□□ -0.24
CTNS-209ENST00000574776 ZNF117Q03924 483 aa13.58□□□□□ -0.24
CTNS-209ENST00000574776 MLC1Q15049 377 aa13.58□□□□□ -0.24
CTNS-209ENST00000574776 ARL13AQ5H913 290 aaPredicted RBP13.58□□□□□ -0.24
CTNS-209ENST00000574776 CBLN3Q6UW01 205 aa13.58□□□□□ -0.24
CTNS-209ENST00000574776 ZNF704Q6ZNC4 412 aaPredicted RBP13.58□□□□□ -0.24
CTNS-209ENST00000574776 STK32CQ86UX6 486 aa13.58□□□□□ -0.24
CTNS-209ENST00000574776 EIF1ADQ8N9N8 165 aaKnown RBP13.58□□□□□ -0.24
CTNS-209ENST00000574776 TWIST2Q8WVJ9 160 aa13.58□□□□□ -0.24
CTNS-209ENST00000574776 KLHL15Q96M94 604 aa13.58□□□□□ -0.24
CTNS-209ENST00000574776 GSX2Q9BZM3 304 aa13.58□□□□□ -0.24
CTNS-209ENST00000574776 PIGUQ9H490 435 aa13.58□□□□□ -0.24
CTNS-209ENST00000574776 KCNE3Q9Y6H6 103 aa13.58□□□□□ -0.24
CTNS-209ENST00000574776 FREM1Q5H8C1 2179 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 TMEM114B3SHH9 223 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 ZNF195O14628 629 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 SCAMP2O15127 329 aaKnown RBP13.57□□□□□ -0.24
CTNS-209ENST00000574776 PEX11AO75192 247 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 SLU7O95391 586 aaKnown RBP13.57□□□□□ -0.24
CTNS-209ENST00000574776 CNOT4O95628 575 aaKnown RBP13.57□□□□□ -0.24
CTNS-209ENST00000574776 HSPA4LO95757 839 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 NUDT14O95848 222 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 ATP6V1C1P21283 382 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 PCSK6P29122 969 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 AGTR1P30556 359 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 HPCAL1P37235 193 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 EIF1P41567 113 aaKnown RBP13.57□□□□□ -0.24
CTNS-209ENST00000574776 CCT3P49368 545 aaKnown RBP13.57□□□□□ -0.24
CTNS-209ENST00000574776 NR1H2P55055 460 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 FOXF1Q12946 379 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 KLHL26Q53HC5 615 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 NUFIP2Q7Z417 695 aaKnown RBP13.57□□□□□ -0.24
CTNS-209ENST00000574776 ATP6V1C2Q8NEY4 427 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 FBXO27Q8NI29 283 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 AGR3Q8TD06 166 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 ADAMTS15Q8TE58 950 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 ABHD3Q8WU67 409 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 TMEM171Q8WVE6 324 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 IGFBPL1Q8WX77 278 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 OR5P2Q8WZ92 322 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 REXO5Q96IC2 774 aaKnown RBP13.57□□□□□ -0.24
CTNS-209ENST00000574776 PPP3R2Q96LZ3 170 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 STACQ99469 402 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 MECRQ9BV79 373 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 SRXN1Q9BYN0 137 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 TIGARQ9NQ88 270 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 DUSP22Q9NRW4 184 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 CARD8Q9Y2G2 431 aa13.57□□□□□ -0.24
CTNS-209ENST00000574776 GTPBP1O00178 669 aaKnown RBP13.56□□□□□ -0.24
CTNS-209ENST00000574776 NPHS1O60500 1241 aa13.56□□□□□ -0.24
CTNS-209ENST00000574776 PABPC4LP0CB38 370 aaKnown RBP13.56□□□□□ -0.24
CTNS-209ENST00000574776 DDX5P17844 614 aaKnown RBP13.56□□□□□ -0.24
CTNS-209ENST00000574776 PSMB1P20618 241 aaKnown RBP13.56□□□□□ -0.24
CTNS-209ENST00000574776 TP53BP2Q13625 1128 aa13.56□□□□□ -0.24
CTNS-209ENST00000574776 TSC22D1Q15714 1073 aa13.56□□□□□ -0.24
CTNS-209ENST00000574776 TOMM34Q15785 309 aaPredicted RBP13.56□□□□□ -0.24
CTNS-209ENST00000574776 ZNF239Q16600 458 aaKnown RBP13.56□□□□□ -0.24
CTNS-209ENST00000574776 TMEM176BQ3YBM2 270 aaPredicted RBP13.56□□□□□ -0.24
CTNS-209ENST00000574776 TMEM201Q5SNT2 666 aa13.56□□□□□ -0.24
CTNS-209ENST00000574776 CDC73Q6P1J9 531 aa13.56□□□□□ -0.24
CTNS-209ENST00000574776 MTERF4Q7Z6M4 381 aaKnown RBP13.56□□□□□ -0.24
CTNS-209ENST00000574776 TUSC5Q8IXB3 177 aa13.56□□□□□ -0.24
CTNS-209ENST00000574776 BANPQ8N9N5 519 aa13.56□□□□□ -0.24
CTNS-209ENST00000574776 OR2W6PQ8NHA6 318 aa13.56□□□□□ -0.24
CTNS-209ENST00000574776 GPR119Q8TDV5 335 aa13.56□□□□□ -0.24
CTNS-209ENST00000574776 S100PBPQ96BU1 408 aa13.56□□□□□ -0.24
CTNS-209ENST00000574776 C3orf30Q96M34 536 aa13.56□□□□□ -0.24
CTNS-209ENST00000574776 C1orf50Q9BV19 199 aa13.56□□□□□ -0.24
CTNS-209ENST00000574776 ACTRT3Q9BYD9 372 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms