RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 CFAP73A6NFT4 308 aa21.4■■□□□ 1.02
RAB40C-212ENST00000569575 AQP12BA6NM10 295 aa21.4■■□□□ 1.02
RAB40C-212ENST00000569575 ACOT8O14734 319 aa21.4■■□□□ 1.02
RAB40C-212ENST00000569575 HCRTR2O43614 444 aa21.4■■□□□ 1.02
RAB40C-212ENST00000569575 PDE5AO76074 875 aa21.4■■□□□ 1.02
RAB40C-212ENST00000569575 LGI1O95970 557 aa21.4■■□□□ 1.02
RAB40C-212ENST00000569575 CRYABP02511 175 aaKnown RBP21.4■■□□□ 1.02
RAB40C-212ENST00000569575 MEOX1P50221 254 aa21.4■■□□□ 1.02
RAB40C-212ENST00000569575 DMTNQ08495 405 aa21.4■■□□□ 1.02
RAB40C-212ENST00000569575 CD226Q15762 336 aa21.4■■□□□ 1.02
RAB40C-212ENST00000569575 GLYR1Q49A26 553 aaPredicted RBP21.4■■□□□ 1.02
RAB40C-212ENST00000569575 LRRC23Q53EV4 343 aaPredicted RBP21.4■■□□□ 1.02
RAB40C-212ENST00000569575 ZNF836Q6ZNA1 936 aa21.4■■□□□ 1.02
RAB40C-212ENST00000569575 OLIG3Q7RTU3 272 aa21.4■■□□□ 1.02
RAB40C-212ENST00000569575 AQP12AQ8IXF9 295 aa21.4■■□□□ 1.02
RAB40C-212ENST00000569575 C10orf67Q8IYJ2 551 aa21.4■■□□□ 1.02
RAB40C-212ENST00000569575 WDSUB1Q8N9V3 476 aa21.4■■□□□ 1.02
RAB40C-212ENST00000569575 PCDHAC1Q9H158 963 aa21.4■■□□□ 1.02
RAB40C-212ENST00000569575 GALNT9Q9HCQ5 603 aa21.4■■□□□ 1.02
RAB40C-212ENST00000569575 PACSIN3Q9UKS6 424 aa21.4■■□□□ 1.02
RAB40C-212ENST00000569575 POMPQ9Y244 141 aa21.4■■□□□ 1.02
RAB40C-212ENST00000569575 ATXN7O15265 892 aaPredicted RBP21.39■■□□□ 1.01
RAB40C-212ENST00000569575 CIB2O75838 187 aa21.39■■□□□ 1.01
RAB40C-212ENST00000569575 FESP07332 822 aa21.39■■□□□ 1.01
RAB40C-212ENST00000569575 UMPSP11172 480 aa21.39■■□□□ 1.01
RAB40C-212ENST00000569575 DNASE1L1P49184 302 aa21.39■■□□□ 1.01
RAB40C-212ENST00000569575 SKP2Q13309 424 aa21.39■■□□□ 1.01
RAB40C-212ENST00000569575 CBFBQ13951 182 aa21.39■■□□□ 1.01
RAB40C-212ENST00000569575 DUSP7Q16829 419 aa21.39■■□□□ 1.01
RAB40C-212ENST00000569575 BICRALQ6AI39 1079 aa21.39■■□□□ 1.01
RAB40C-212ENST00000569575 OR4K17Q8NGC6 315 aa21.39■■□□□ 1.01
RAB40C-212ENST00000569575 OR5W2Q8NH69 310 aa21.39■■□□□ 1.01
RAB40C-212ENST00000569575 CLPTM1LQ96KA5 538 aa21.39■■□□□ 1.01
RAB40C-212ENST00000569575 POLR2J2Q9GZM3 115 aaKnown RBP21.39■■□□□ 1.01
RAB40C-212ENST00000569575 POLR2J3Q9H1A7 115 aaKnown RBP21.39■■□□□ 1.01
RAB40C-212ENST00000569575 DNAJB12Q9NXW2 375 aaKnown RBP21.39■■□□□ 1.01
RAB40C-212ENST00000569575 TUBA8Q9NY65 449 aaPredicted RBP21.39■■□□□ 1.01
RAB40C-212ENST00000569575 ICAM5Q9UMF0 924 aa21.39■■□□□ 1.01
RAB40C-212ENST00000569575 CSAG2Q9Y5P2 127 aa21.39■■□□□ 1.01
RAB40C-212ENST00000569575 CACNA1BQ00975 2339 aa21.38■■□□□ 1.01
RAB40C-212ENST00000569575 ANKUB1A6NFN9 424 aa21.38■■□□□ 1.01
RAB40C-212ENST00000569575 FAM47E-STBD1D6RA91 191 aa21.38■■□□□ 1.01
RAB40C-212ENST00000569575 FMO6PO60774 539 aa21.38■■□□□ 1.01
RAB40C-212ENST00000569575 GLSO94925 669 aaPredicted RBP21.38■■□□□ 1.01
RAB40C-212ENST00000569575 SERPINA1P01009 418 aa21.38■■□□□ 1.01
RAB40C-212ENST00000569575 PGCP20142 388 aa21.38■■□□□ 1.01
RAB40C-212ENST00000569575 CD247P20963 164 aa21.38■■□□□ 1.01
RAB40C-212ENST00000569575 CRYBA2P53672 197 aa21.38■■□□□ 1.01
RAB40C-212ENST00000569575 DSCR4P56555 118 aaPredicted RBP21.38■■□□□ 1.01
RAB40C-212ENST00000569575 MS4A2Q01362 244 aa21.38■■□□□ 1.01
RAB40C-212ENST00000569575 KCNC4Q03721 635 aa21.38■■□□□ 1.01
RAB40C-212ENST00000569575 FLOT2Q14254 428 aa21.38■■□□□ 1.01
RAB40C-212ENST00000569575 PLEKHN1Q494U1 663 aaPredicted RBP21.38■■□□□ 1.01
RAB40C-212ENST00000569575 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.38■■□□□ 1.01
RAB40C-212ENST00000569575 TMEM234Q8WY98 164 aa21.38■■□□□ 1.01
RAB40C-212ENST00000569575 CCDC124Q96CT7 223 aaKnown RBP21.38■■□□□ 1.01
RAB40C-212ENST00000569575 UGT2B28Q9BY64 529 aa21.38■■□□□ 1.01
RAB40C-212ENST00000569575 GMPR2Q9P2T1 348 aaKnown RBP21.38■■□□□ 1.01
RAB40C-212ENST00000569575 ANAPC2Q9UJX6 822 aa21.38■■□□□ 1.01
RAB40C-212ENST00000569575 LHX6Q9UPM6 363 aa21.38■■□□□ 1.01
RAB40C-212ENST00000569575 C15orf41Q9Y2V0 281 aa21.38■■□□□ 1.01
RAB40C-212ENST00000569575 MGAQ8IWI9 3026 aa21.37■■□□□ 1.01
RAB40C-212ENST00000569575 CENPVL1A0A0U1RR11 272 aa21.37■■□□□ 1.01
RAB40C-212ENST00000569575 LINC01387J3KSC0 135 aa21.37■■□□□ 1.01
RAB40C-212ENST00000569575 NCK1P16333 377 aa21.37■■□□□ 1.01
RAB40C-212ENST00000569575 SRD5A2P31213 254 aa21.37■■□□□ 1.01
RAB40C-212ENST00000569575 MSX2P35548 267 aaPredicted RBP21.37■■□□□ 1.01
RAB40C-212ENST00000569575 ST13P50502 369 aaKnown RBP21.37■■□□□ 1.01
RAB40C-212ENST00000569575 GPR85P60893 370 aa21.37■■□□□ 1.01
RAB40C-212ENST00000569575 PLGLB1Q02325 96 aa21.37■■□□□ 1.01
RAB40C-212ENST00000569575 ZNF117Q03924 483 aa21.37■■□□□ 1.01
RAB40C-212ENST00000569575 OR2M3Q8NG83 312 aa21.37■■□□□ 1.01
RAB40C-212ENST00000569575 NR4A3Q92570 626 aa21.37■■□□□ 1.01
RAB40C-212ENST00000569575 HES7Q9BYE0 225 aa21.37■■□□□ 1.01
RAB40C-212ENST00000569575 TTTY12Q9BZ98 90 aa21.37■■□□□ 1.01
RAB40C-212ENST00000569575 RTN4RQ9BZR6 473 aa21.37■■□□□ 1.01
RAB40C-212ENST00000569575 TESQ9UGI8 421 aaKnown RBP21.37■■□□□ 1.01
RAB40C-212ENST00000569575 CARD8Q9Y2G2 431 aa21.37■■□□□ 1.01
RAB40C-212ENST00000569575 LINGO3P0C6S8 592 aa21.36■■□□□ 1.01
RAB40C-212ENST00000569575 UBTFL6P0CB48 400 aaPredicted RBP21.36■■□□□ 1.01
RAB40C-212ENST00000569575 ADH6P28332 368 aa21.36■■□□□ 1.01
RAB40C-212ENST00000569575 EIF1P41567 113 aaKnown RBP21.36■■□□□ 1.01
RAB40C-212ENST00000569575 DLX5P56178 289 aa21.36■■□□□ 1.01
RAB40C-212ENST00000569575 COPZ1P61923 177 aa21.36■■□□□ 1.01
RAB40C-212ENST00000569575 NRF1Q16656 503 aa21.36■■□□□ 1.01
RAB40C-212ENST00000569575 IFI44LQ53G44 452 aa21.36■■□□□ 1.01
RAB40C-212ENST00000569575 RANBP3LQ86VV4 465 aaPredicted RBP21.36■■□□□ 1.01
RAB40C-212ENST00000569575 CLIP4Q8N3C7 705 aa21.36■■□□□ 1.01
RAB40C-212ENST00000569575 FAM109AQ8N4B1 249 aa21.36■■□□□ 1.01
RAB40C-212ENST00000569575 SMYD1Q8NB12 490 aa21.36■■□□□ 1.01
RAB40C-212ENST00000569575 GEMIN6Q8WXD5 167 aaKnown RBP21.36■■□□□ 1.01
RAB40C-212ENST00000569575 ST8SIA1Q92185 356 aa21.36■■□□□ 1.01
RAB40C-212ENST00000569575 CNOT9Q92600 299 aaKnown RBP21.36■■□□□ 1.01
RAB40C-212ENST00000569575 ZBTB8AQ96BR9 441 aa21.36■■□□□ 1.01
RAB40C-212ENST00000569575 PYURFQ96I23 114 aa21.36■■□□□ 1.01
RAB40C-212ENST00000569575 JSRP1Q96MG2 331 aaPredicted RBP21.36■■□□□ 1.01
RAB40C-212ENST00000569575 ARHGDIGQ99819 225 aa21.36■■□□□ 1.01
RAB40C-212ENST00000569575 UBQLN3Q9H347 655 aa21.36■■□□□ 1.01
RAB40C-212ENST00000569575 MAGIXQ9H6Y5 334 aa21.36■■□□□ 1.01
RAB40C-212ENST00000569575 ACKR4Q9NPB9 350 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms