RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 GZMKP49863 264 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 CAPZA1P52907 286 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 SEC13P55735 322 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 YPEL5P62699 121 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 FABP5Q01469 135 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 CSTF1Q05048 431 aaKnown RBP7.11□□□□□ -1.27
ATXN3-250ENST00000568290 IL10RAQ13651 578 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 ENPP2Q13822 863 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 IRF4Q15306 451 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 SF3B4Q15427 424 aaKnown RBP eCLIP7.11□□□□□ -1.27
ATXN3-250ENST00000568290 TATDN3Q17R31 274 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 ISXQ2M1V0 245 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 ITPRIPL2Q3MIP1 535 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 SOWAHCQ53LP3 525 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-250ENST00000568290 GARNL3Q5VVW2 1013 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 SLC6A19Q695T7 634 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 ARMC6Q6NXE6 501 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 RPL22L1Q6P5R6 122 aaKnown RBP7.11□□□□□ -1.27
ATXN3-250ENST00000568290 OVCH1Q7RTY7 1134 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 OAFQ86UD1 273 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 LHFPL3Q86UP9 236 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 PAQR7Q86WK9 346 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 RBM45Q8IUH3 476 aaKnown RBP7.11□□□□□ -1.27
ATXN3-250ENST00000568290 GRAMD2AQ8IUY3 354 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 NRMQ8IXM6 262 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 GHDCQ8N2G8 530 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 TOMM5Q8N4H5 51 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 C2orf73Q8N5S3 287 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-250ENST00000568290 ARIH2OSQ8N7S6 290 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 ZNF366Q8N895 744 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 LINC01555Q8NAE3 123 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 TP53I13Q8NBR0 393 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-250ENST00000568290 SLC37A3Q8NCC5 494 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 OR2T27Q8NH04 317 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 SPRYD4Q8WW59 207 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-250ENST00000568290 ING5Q8WYH8 240 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 FGF11Q92914 225 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 NXPE3Q969Y0 559 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 CNRIP1Q96F85 164 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-250ENST00000568290 RBM18Q96H35 190 aaKnown RBP7.11□□□□□ -1.27
ATXN3-250ENST00000568290 PAWRQ96IZ0 340 aaKnown RBP7.11□□□□□ -1.27
ATXN3-250ENST00000568290 ZNF681Q96N22 645 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 SLC6A18Q96N87 628 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 KCNJ15Q99712 375 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 APOOQ9BUR5 198 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 TMED9Q9BVK6 235 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 IFT27Q9BW83 186 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 SLC19A3Q9BZV2 496 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 ZNF350Q9GZX5 532 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 MIXL1Q9H2W2 232 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 OR52D1Q9H346 318 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 UBQLN3Q9H347 655 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 LRRN3Q9H3W5 708 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 EGLN3Q9H6Z9 239 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 GPN1Q9HCN4 374 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-250ENST00000568290 SEMA4GQ9NTN9 838 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 MCUBQ9NWR8 336 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 PAQR5Q9NXK6 330 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-250ENST00000568290 SIDT1Q9NXL6 827 aaKnown RBP7.11□□□□□ -1.27
ATXN3-250ENST00000568290 SLC23A2Q9UGH3 650 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 PCOLCE2Q9UKZ9 415 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 SLC7A7Q9UM01 511 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 ATG4BQ9Y4P1 393 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 RNF215Q9Y6U7 377 aa7.11□□□□□ -1.27
ATXN3-250ENST00000568290 GOLGB1Q14789 3259 aaKnown RBP7.1□□□□□ -1.27
ATXN3-250ENST00000568290 TET1Q8NFU7 2136 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 MTCL1Q9Y4B5 1905 aaKnown RBP7.1□□□□□ -1.27
ATXN3-250ENST00000568290 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 LRRC72A6NJI9 287 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 WASHC1A8K0Z3 465 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 PHYHO14832 338 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 MID1O15344 667 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 ZNF749O43361 778 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 PLRG1O43660 514 aaKnown RBP7.1□□□□□ -1.27
ATXN3-250ENST00000568290 PRICKLE3O43900 615 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-250ENST00000568290 RNGTTO60942 597 aaKnown RBP7.1□□□□□ -1.27
ATXN3-250ENST00000568290 NOS1APO75052 506 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-250ENST00000568290 DNAJB6O75190 326 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 RFPL3O75679 317 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 OR2B3O76000 313 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 NDUFB2O95178 105 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 TBX6O95947 436 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-250ENST00000568290 C1QCP02747 245 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 RAB40ALP0C0E4 278 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 IFI30P13284 250 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 ARSBP15848 533 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 EPCAMP16422 314 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 CERS1P27544 350 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 APEX1P27695 318 aaKnown RBP7.1□□□□□ -1.27
ATXN3-250ENST00000568290 LCN1P31025 176 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 MMP15P51511 669 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 ARPC4P59998 168 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 PRPS1P60891 318 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 C19orf57Q0VDD7 668 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 FOXD4Q12950 439 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-250ENST00000568290 PON3Q15166 354 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 CLPPQ16740 277 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-250ENST00000568290 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.1□□□□□ -1.27
ATXN3-250ENST00000568290 COL28A1Q2UY09 1125 aa7.1□□□□□ -1.27
ATXN3-250ENST00000568290 YIF1BQ5BJH7 314 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms