RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 MR1Q95460 341 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 FKBP10Q96AY3 582 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 SH3YL1Q96HL8 342 aaPredicted RBP6.51□□□□□ -1.37
SMG1-215ENST00000568239 TSC22D3Q99576 134 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 COPS4Q9BT78 406 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 PLA2G12AQ9BZM1 189 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 ZBTB20Q9HC78 741 aaPredicted RBP6.51□□□□□ -1.37
SMG1-215ENST00000568239 KRCC1Q9NPI7 259 aaPredicted RBP6.51□□□□□ -1.37
SMG1-215ENST00000568239 UBQLN4Q9NRR5 601 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 RXFP3Q9NSD7 469 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 DNAJB12Q9NXW2 375 aaKnown RBP6.51□□□□□ -1.37
SMG1-215ENST00000568239 SELENONQ9NZV5 590 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 GPN3Q9UHW5 284 aaPredicted RBP6.51□□□□□ -1.37
SMG1-215ENST00000568239 MRTO4Q9UKD2 239 aaKnown RBP6.51□□□□□ -1.37
SMG1-215ENST00000568239 PCDHGA5Q9Y5G8 931 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 MPDZO75970 2070 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 SERINC4A6NH21 518 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 PCNX2A6NKB5 2137 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 TTC36A6NLP5 189 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 TLX2O43763 284 aaPredicted RBP6.51□□□□□ -1.37
SMG1-215ENST00000568239 UTS2O95399 124 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 CH25HO95992 272 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 SAGP10523 405 aaPredicted RBP6.51□□□□□ -1.37
SMG1-215ENST00000568239 FUT1P19526 365 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 SLC5A2P31639 672 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 MAP2K4P45985 399 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 OMPP47874 163 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 MLLT10P55197 1068 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 CXCR4P61073 352 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 SLC35A2P78381 396 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 PLAURQ03405 335 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 FGFBP1Q14512 234 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 SNAPC1Q16533 368 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 WDR88Q6ZMY6 472 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 C16orf47Q6ZP98 133 aaPredicted RBP6.51□□□□□ -1.37
SMG1-215ENST00000568239 MBOAT2Q6ZWT7 520 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 ZNF550Q7Z398 422 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 BCDIN3DQ7Z5W3 292 aaKnown RBP6.51□□□□□ -1.37
SMG1-215ENST00000568239 CDK20Q8IZL9 346 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 STX19Q8N4C7 294 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 TMEM239Q8WW34 195 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 ADIPOR1Q96A54 375 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 LOXL4Q96JB6 756 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 CMKLR1Q99788 373 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 ZNF559Q9BR84 538 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 DPH1Q9BZG8 443 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 TGIF2Q9GZN2 237 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 ANKRD19PQ9H560 264 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 ATP13A2Q9NQ11 1180 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 C14orf105Q9NVL8 296 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 CLN6Q9NWW5 311 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 SLC39A1Q9NY26 324 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 GPR83Q9NYM4 423 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 DNAJC27Q9NZQ0 273 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 AKAP7Q9P0M2 348 aaPredicted RBP6.51□□□□□ -1.37
SMG1-215ENST00000568239 RSL24D1Q9UHA3 163 aaKnown RBP6.51□□□□□ -1.37
SMG1-215ENST00000568239 PCDHGA10Q9Y5H3 936 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 NUP210LQ5VU65 1888 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 CNOT1A5YKK6 2376 aaKnown RBP6.5□□□□□ -1.37
SMG1-215ENST00000568239 A0A1B0GWA3 101 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 FRG2CA6NGY1 282 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 ICOSLGO75144 302 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 ACP1P24666 158 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 C21orf33P30042 268 aaPredicted RBP6.5□□□□□ -1.37
SMG1-215ENST00000568239 GSTT1P30711 240 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 GIPRP48546 466 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 EMX1Q04741 257 aaPredicted RBP6.5□□□□□ -1.37
SMG1-215ENST00000568239 ZFP36L1Q07352 338 aaKnown RBP6.5□□□□□ -1.37
SMG1-215ENST00000568239 TSPAN31Q12999 210 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 TRA2AQ13595 282 aaKnown RBP eCLIP6.5□□□□□ -1.37
SMG1-215ENST00000568239 CD226Q15762 336 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 ZNF141Q15928 474 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.5□□□□□ -1.37
SMG1-215ENST00000568239 ZBED5Q49AG3 693 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 SLC30A6Q6NXT4 461 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 PAPD4Q6PIY7 484 aaKnown RBP6.5□□□□□ -1.37
SMG1-215ENST00000568239 HSDL2Q6YN16 418 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 BMP8AQ7Z5Y6 402 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 ANKRD37Q7Z713 158 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 KIF18BQ86Y91 864 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 C7orf57Q8NEG2 295 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 ZNF566Q969W8 418 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 OTULINQ96BN8 352 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 LPAR4Q99677 370 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 PRSS27Q9BQR3 290 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 TSSK6Q9BXA6 273 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 WWTR1Q9GZV5 400 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 LHPPQ9H008 270 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 PLSCR2Q9NRY7 297 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 C20orf141Q9NUB4 165 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 TBC1D23Q9NUY8 699 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 CARD8Q9Y2G2 431 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 MED31Q9Y3C7 131 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 CEPT1Q9Y6K0 416 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 FREM2Q5SZK8 3169 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 RIF1Q5UIP0 2472 aaKnown RBP6.5□□□□□ -1.37
SMG1-215ENST00000568239 IGLV3-12A0A075B6K2 115 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 TRIM64CA6NLI5 447 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 CDC42EP2O14613 210 aa6.5□□□□□ -1.37
SMG1-215ENST00000568239 MPZL2O60487 215 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms