RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 CHERPQ8IWX8 916 aaKnown RBP16.36■□□□□ 0.21
COMMD4-222ENST00000568034 CMIPQ8IY22 773 aa16.36■□□□□ 0.21
COMMD4-222ENST00000568034 OR4K17Q8NGC6 315 aa16.36■□□□□ 0.21
COMMD4-222ENST00000568034 CNOT9Q92600 299 aaKnown RBP16.36■□□□□ 0.21
COMMD4-222ENST00000568034 ZNF524Q96C55 264 aa16.36■□□□□ 0.21
COMMD4-222ENST00000568034 SLC7A6OSQ96CW6 309 aaPredicted RBP16.36■□□□□ 0.21
COMMD4-222ENST00000568034 ARSGQ96EG1 525 aa16.36■□□□□ 0.21
COMMD4-222ENST00000568034 C1GALT1C1Q96EU7 318 aa16.36■□□□□ 0.21
COMMD4-222ENST00000568034 GPR137Q96N19 417 aa16.36■□□□□ 0.21
COMMD4-222ENST00000568034 OR2B2Q9GZK3 357 aa16.36■□□□□ 0.21
COMMD4-222ENST00000568034 C1orf21Q9H246 121 aa16.36■□□□□ 0.21
COMMD4-222ENST00000568034 PLSCR2Q9NRY7 297 aa16.36■□□□□ 0.21
COMMD4-222ENST00000568034 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.36■□□□□ 0.21
COMMD4-222ENST00000568034 NDE1Q9NXR1 346 aa16.36■□□□□ 0.21
COMMD4-222ENST00000568034 DNAJB12Q9NXW2 375 aaKnown RBP16.36■□□□□ 0.21
COMMD4-222ENST00000568034 B4GALT7Q9UBV7 327 aa16.36■□□□□ 0.21
COMMD4-222ENST00000568034 CD300AQ9UGN4 299 aa16.36■□□□□ 0.21
COMMD4-222ENST00000568034 NPIPA1Q9UND3 350 aa16.36■□□□□ 0.21
COMMD4-222ENST00000568034 SLC35A3Q9Y2D2 325 aa16.36■□□□□ 0.21
COMMD4-222ENST00000568034 HEATR5AQ86XA9 2040 aa16.36■□□□□ 0.21
COMMD4-222ENST00000568034 FREM3P0C091 2139 aa16.36■□□□□ 0.21
COMMD4-222ENST00000568034 ZNF264O43296 627 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 HCRTR2O43614 444 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 EIF4E2O60573 245 aaKnown RBP16.35■□□□□ 0.21
COMMD4-222ENST00000568034 DNAJA2O60884 412 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 ADAM11O75078 769 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 MFN2O95140 757 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 CSTAP01040 98 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 UBTFL6P0CB48 400 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-222ENST00000568034 IL7RP16871 459 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 GDF1P27539 372 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 SRD5A2P31213 254 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 DMTNQ08495 405 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 FXNQ16595 210 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 DHRS4L2Q6PKH6 230 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 EIF3MQ7L2H7 374 aaKnown RBP16.35■□□□□ 0.21
COMMD4-222ENST00000568034 CLIP4Q8N3C7 705 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 B4GALNT2Q8NHY0 566 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 TAMM41Q96BW9 452 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 CDRT15Q96T59 188 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 LAT2Q9GZY6 243 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 DEFB127Q9H1M4 99 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 ACKR4Q9NPB9 350 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 AGPAT4Q9NRZ5 378 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 RLIMQ9NVW2 624 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 ADA2Q9NZK5 511 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-222ENST00000568034 IFT52Q9Y366 437 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 NBASA2RRP1 2371 aa16.35■□□□□ 0.21
COMMD4-222ENST00000568034 ZNF462Q96JM2 2506 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 CDHR4A6H8M9 788 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 EIF4E1BA6NMX2 242 aaKnown RBP16.34■□□□□ 0.21
COMMD4-222ENST00000568034 TMEM229AB2RXF0 380 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 M0QX08 132 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 GMFGO60234 142 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 ZIC3O60481 467 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 TPST1O60507 370 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 IGHG3P01860 377 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 OPN1SWP03999 348 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 ENDOUP21128 410 aaKnown RBP16.34■□□□□ 0.21
COMMD4-222ENST00000568034 MSX1P28360 303 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 PRKAR1BP31321 381 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 P2RX1P51575 399 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 SUMO3P55854 103 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-222ENST00000568034 DSCR4P56555 118 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-222ENST00000568034 TLE1Q04724 770 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 CEACAM7Q14002 265 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 GLIPR1L2Q4G1C9 344 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 EIPR1Q53HC9 387 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 ZNF311Q5JNZ3 666 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 INTS11Q5TA45 600 aaKnown RBP16.34■□□□□ 0.21
COMMD4-222ENST00000568034 ARSKQ6UWY0 536 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 FGD2Q7Z6J4 655 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 PATL1Q86TB9 770 aaKnown RBP16.34■□□□□ 0.21
COMMD4-222ENST00000568034 KRT73Q86Y46 540 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 SPPL2CQ8IUH8 684 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 RNF148Q8N7C7 305 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 FAM83FQ8NEG4 500 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-222ENST00000568034 GPR32P1Q8NGA4 272 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 MIB2Q96AX9 1013 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 NPAS1Q99742 590 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 KCTD14Q9BQ13 255 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-222ENST00000568034 SLC6A15Q9H2J7 730 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 HHATLQ9HCP6 504 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 EXOSC3Q9NQT5 275 aaKnown RBP16.34■□□□□ 0.21
COMMD4-222ENST00000568034 MED12Q93074 2177 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 DNAJC13O75165 2243 aa16.34■□□□□ 0.21
COMMD4-222ENST00000568034 ANKUB1A6NFN9 424 aa16.33■□□□□ 0.2
COMMD4-222ENST00000568034 GTPBP1O00178 669 aaKnown RBP16.33■□□□□ 0.2
COMMD4-222ENST00000568034 PDE9AO76083 593 aa16.33■□□□□ 0.2
COMMD4-222ENST00000568034 HSD17B1P14061 328 aa16.33■□□□□ 0.2
COMMD4-222ENST00000568034 CD247P20963 164 aa16.33■□□□□ 0.2
COMMD4-222ENST00000568034 DPP4P27487 766 aa16.33■□□□□ 0.2
COMMD4-222ENST00000568034 HTR1EP28566 365 aa16.33■□□□□ 0.2
COMMD4-222ENST00000568034 B3GALT5-AS1P59052 145 aa16.33■□□□□ 0.2
COMMD4-222ENST00000568034 FOXK1P85037 733 aa16.33■□□□□ 0.2
COMMD4-222ENST00000568034 HSF1Q00613 529 aa16.33■□□□□ 0.2
COMMD4-222ENST00000568034 GANABQ14697 944 aaKnown RBP16.33■□□□□ 0.2
COMMD4-222ENST00000568034 SLC10A1Q14973 349 aa16.33■□□□□ 0.2
COMMD4-222ENST00000568034 LARS2Q15031 903 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms