RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 PCM1Q15154 2024 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 TMEM150CB9EJG8 249 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 CTXN2P0C2S0 81 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 TIMP2P16035 220 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 MMP12P39900 470 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 LEPRP48357 1165 aaKnown RBP3.15□□□□□ -1.91
CHD9-213ENST00000564845 SEC61A1P61619 476 aaKnown RBP3.15□□□□□ -1.91
CHD9-213ENST00000564845 LIPEQ05469 1076 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 TMEM30BQ3MIR4 351 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 USP53Q70EK8 1073 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 RNF113BQ8IZP6 322 aaKnown RBP3.15□□□□□ -1.91
CHD9-213ENST00000564845 CLEC1AQ8NC01 280 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 OR10H5Q8NGA6 315 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 ORAI1Q96D31 301 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 TXNDC15Q96J42 360 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 DDOQ99489 341 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 NPLQ9BXD5 320 aaPredicted RBP3.15□□□□□ -1.91
CHD9-213ENST00000564845 ALOXE3Q9BYJ1 711 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 MMP27Q9H306 513 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 GPN2Q9H9Y4 310 aaPredicted RBP3.15□□□□□ -1.91
CHD9-213ENST00000564845 DENRO43583 198 aaKnown RBP3.15□□□□□ -1.91
CHD9-213ENST00000564845 CKMT1AP12532 417 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 JUPP14923 745 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 PTPN6P29350 595 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 BMPR1AP36894 532 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 MAN2A2P49641 1150 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 POLR2JP52435 117 aaKnown RBP3.15□□□□□ -1.91
CHD9-213ENST00000564845 RELAQ04206 551 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 MTAPQ13126 283 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 DOC2BQ14184 412 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 RAB39AQ14964 217 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 C6orf136Q5SQH8 315 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 ENPP7Q6UWV6 458 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 RPS19BP1Q86WX3 136 aaKnown RBP3.15□□□□□ -1.91
CHD9-213ENST00000564845 C1orf87Q8N0U7 546 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 ZCCHC7Q8N3Z6 543 aaKnown RBP3.15□□□□□ -1.91
CHD9-213ENST00000564845 POC1BQ8TC44 478 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 C12orf43Q96C57 262 aaKnown RBP3.15□□□□□ -1.91
CHD9-213ENST00000564845 S100A16Q96FQ6 103 aaKnown RBP3.15□□□□□ -1.91
CHD9-213ENST00000564845 CMTM3Q96MX0 182 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 TOX2Q96NM4 488 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 TTYH2Q9BSA4 534 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 TOR4AQ9NXH8 423 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 ABRACLQ9P1F3 81 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 SLC7A11Q9UPY5 501 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 GRIP1Q9Y3R0 1128 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 GBF1Q92538 1859 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 E9PI62 339 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 MANBAO00462 879 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 TRMUO75648 421 aaKnown RBP3.15□□□□□ -1.91
CHD9-213ENST00000564845 LCATP04180 440 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 UBBP0CG47 229 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 AOAHP28039 575 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 RGS19P49795 217 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 ZNF630Q2M218 657 aaPredicted RBP3.15□□□□□ -1.91
CHD9-213ENST00000564845 GPR107Q5VW38 600 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 AFMIDQ63HM1 303 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 CAMKMTQ7Z624 323 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 DHDDSQ86SQ9 333 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 JAZF1Q86VZ6 243 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 CCDC116Q8IYX3 515 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 DCAF4L2Q8NA75 395 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 SLC7A6Q92536 515 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 ZUFSPQ96AP4 578 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 PPCDCQ96CD2 204 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 ZNF587Q96SQ5 575 aaPredicted RBP3.15□□□□□ -1.91
CHD9-213ENST00000564845 TBX5Q99593 518 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 ELF4Q99607 663 aaPredicted RBP3.15□□□□□ -1.91
CHD9-213ENST00000564845 DPEP2Q9H4A9 486 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 PLK3Q9H4B4 646 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 SMPD3Q9NY59 655 aaPredicted RBP3.15□□□□□ -1.91
CHD9-213ENST00000564845 MYOTQ9UBF9 498 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 OR51B4Q9Y5P0 310 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 CENPVL1A0A0U1RR11 272 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 IMPA2O14732 288 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 B3GALT2O43825 422 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 WISP1O95388 367 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 RAF1P04049 648 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 LAMP1P11279 417 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 C5AR1P21730 350 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 HTR2AP28223 471 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 RFC3P40938 356 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 DNAJB13P59910 316 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 ERVK-8P63133 956 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 MERTKQ12866 999 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 QPRTQ15274 297 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 C8orf82Q6P1X6 216 aaPredicted RBP3.14□□□□□ -1.91
CHD9-213ENST00000564845 ZNF227Q86WZ6 799 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 ENTHD1Q8IYW4 607 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 OR9Q2Q8NGE9 314 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 OR5T3Q8NGG3 340 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 PCNPQ8WW12 178 aaKnown RBP3.14□□□□□ -1.91
CHD9-213ENST00000564845 CYYR1Q96J86 154 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 KLHL15Q96M94 604 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 MUS81Q96NY9 551 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 ZNF382Q96SR6 550 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 TBC1D24Q9ULP9 559 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 GPR52Q9Y2T5 361 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 IGLV3-10A0A075B6K4 115 aa3.14□□□□□ -1.91
CHD9-213ENST00000564845 EFCAB9A8MZ26 197 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms