RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 NIPAL3Q6P499 406 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 THSD4Q6ZMP0 1018 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 SLC7A5P1Q8MH63 180 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 GDPD1Q8N9F7 314 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 OR52L1Q8NGH7 329 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 OR52N1Q8NH53 320 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 DMRTB1Q96MA1 342 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 CD180Q99467 661 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 ATF6BQ99941 703 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 TCEAL2Q9H3H9 227 aaPredicted RBP20.73■□□□□ 0.91
SPSB3-206ENST00000564709 CLDND1Q9NY35 253 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 NPAP1Q9NZP6 1156 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 MEIOCA2RUB1 952 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 HRO43593 1189 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 LYPD3O95274 346 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 HLA-DPB1P04440 258 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 ZNF10P21506 573 aaPredicted RBP20.73■□□□□ 0.91
SPSB3-206ENST00000564709 PAICSP22234 425 aaKnown RBP20.73■□□□□ 0.91
SPSB3-206ENST00000564709 GABRA3P34903 492 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 PLAURQ03405 335 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 DLX2Q07687 328 aaPredicted RBP20.73■□□□□ 0.91
SPSB3-206ENST00000564709 ZNF542PQ5EBM4 170 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 ZNF614Q8N883 585 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 BRIX1Q8TDN6 353 aaKnown RBP20.73■□□□□ 0.91
SPSB3-206ENST00000564709 HS6ST2Q96MM7 605 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 SIRT4Q9Y6E7 314 aaPredicted RBP20.73■□□□□ 0.91
SPSB3-206ENST00000564709 LRP4O75096 1905 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 CDHR4A6H8M9 788 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 BHLHE40O14503 412 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 TBXA2RP21731 343 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 LBX1P52954 281 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 SLC16A1P53985 500 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 IFITM2Q01629 132 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 SRSF5Q13243 272 aaKnown RBP20.72■□□□□ 0.91
SPSB3-206ENST00000564709 TOR1AIP2Q8NFQ8 470 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 RBCK1Q9BYM8 510 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 DDX28Q9NUL7 540 aaKnown RBP20.72■□□□□ 0.91
SPSB3-206ENST00000564709 MAT2BQ9NZL9 334 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 TRAV27A0A087WT01 109 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 J3QRE1 110 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 HCRTR1O43613 425 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 REM1O75628 298 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 ATP1B1P05026 303 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 CELA2BP08218 269 aaPredicted RBP20.72■□□□□ 0.91
SPSB3-206ENST00000564709 MRPL3P09001 348 aaKnown RBP20.72■□□□□ 0.91
SPSB3-206ENST00000564709 PPP3R1P63098 170 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 PRICKLE4Q2TBC4 344 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 TMEM91Q6ZNR0 172 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 DGAT2L6Q6ZPD8 337 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 CDRT4Q8N9R6 151 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 SMAP2Q8WU79 429 aaPredicted RBP20.72■□□□□ 0.91
SPSB3-206ENST00000564709 ASB12Q8WXK4 309 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 SLC35B4Q969S0 331 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 ALG8Q9BVK2 526 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 RNF32Q9H0A6 362 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 TP63Q9H3D4 680 aaPredicted RBP20.72■□□□□ 0.91
SPSB3-206ENST00000564709 LYRM4Q9HD34 91 aa20.72■□□□□ 0.91
SPSB3-206ENST00000564709 SGK494L7N484 410 aa20.71■□□□□ 0.91
SPSB3-206ENST00000564709 CYR61O00622 381 aa20.71■□□□□ 0.91
SPSB3-206ENST00000564709 PLA2G10O15496 165 aa20.71■□□□□ 0.91
SPSB3-206ENST00000564709 CTSBP07858 339 aa20.71■□□□□ 0.91
SPSB3-206ENST00000564709 SAGP10523 405 aaPredicted RBP20.71■□□□□ 0.91
SPSB3-206ENST00000564709 CSTF1Q05048 431 aaKnown RBP20.71■□□□□ 0.91
SPSB3-206ENST00000564709 TMEM92Q6UXU6 159 aa20.71■□□□□ 0.91
SPSB3-206ENST00000564709 DNAJA4Q8WW22 397 aaPredicted RBP20.71■□□□□ 0.91
SPSB3-206ENST00000564709 SENP5Q96HI0 755 aaPredicted RBP20.71■□□□□ 0.91
SPSB3-206ENST00000564709 IFT27Q9BW83 186 aa20.71■□□□□ 0.91
SPSB3-206ENST00000564709 LMAN2LQ9H0V9 348 aa20.71■□□□□ 0.91
SPSB3-206ENST00000564709 FBRSQ9HAH7 460 aa20.71■□□□□ 0.91
SPSB3-206ENST00000564709 N6AMT1Q9Y5N5 214 aa20.71■□□□□ 0.91
SPSB3-206ENST00000564709 CCDC182A6NF36 153 aa20.71■□□□□ 0.91
SPSB3-206ENST00000564709 GPR75O95800 540 aa20.71■□□□□ 0.91
SPSB3-206ENST00000564709 BMP7P18075 431 aa20.71■□□□□ 0.91
SPSB3-206ENST00000564709 TPMTP51580 245 aa20.71■□□□□ 0.91
SPSB3-206ENST00000564709 VSX2P58304 361 aaPredicted RBP20.71■□□□□ 0.91
SPSB3-206ENST00000564709 RPS7P62081 194 aaKnown RBP20.71■□□□□ 0.91
SPSB3-206ENST00000564709 DEFB110Q30KQ9 67 aa20.71■□□□□ 0.91
SPSB3-206ENST00000564709 Q6ZSR6 202 aa20.71■□□□□ 0.91
SPSB3-206ENST00000564709 GLCCI1Q86VQ1 547 aa20.71■□□□□ 0.91
SPSB3-206ENST00000564709 GID4Q8IVV7 300 aa20.71■□□□□ 0.91
SPSB3-206ENST00000564709 B3GAT2Q9NPZ5 323 aa20.71■□□□□ 0.91
SPSB3-206ENST00000564709 DUSP22Q9NRW4 184 aa20.71■□□□□ 0.91
SPSB3-206ENST00000564709 USP36Q9P275 1121 aaKnown RBP20.71■□□□□ 0.91
SPSB3-206ENST00000564709 SCML1Q9UN30 329 aa20.71■□□□□ 0.91
SPSB3-206ENST00000564709 KNL1Q8NG31 2342 aa20.71■□□□□ 0.91
SPSB3-206ENST00000564709 RNF13O43567 381 aa20.7■□□□□ 0.9
SPSB3-206ENST00000564709 CLUP10909 449 aa20.7■□□□□ 0.9
SPSB3-206ENST00000564709 ACSM1Q08AH1 577 aa20.7■□□□□ 0.9
SPSB3-206ENST00000564709 IL18Q14116 193 aa20.7■□□□□ 0.9
SPSB3-206ENST00000564709 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.7■□□□□ 0.9
SPSB3-206ENST00000564709 TBRG1Q3YBR2 411 aa20.7■□□□□ 0.9
SPSB3-206ENST00000564709 EXOSC6Q5RKV6 272 aaKnown RBP20.7■□□□□ 0.9
SPSB3-206ENST00000564709 MEPCEQ7L2J0 689 aaKnown RBP20.7■□□□□ 0.9
SPSB3-206ENST00000564709 ZNF438Q7Z4V0 828 aa20.7■□□□□ 0.9
SPSB3-206ENST00000564709 CA13Q8N1Q1 262 aa20.7■□□□□ 0.9
SPSB3-206ENST00000564709 ACBD7Q8N6N7 88 aa20.7■□□□□ 0.9
SPSB3-206ENST00000564709 OR10H4Q8NGA5 316 aa20.7■□□□□ 0.9
SPSB3-206ENST00000564709 OR51A7Q8NH64 312 aa20.7■□□□□ 0.9
SPSB3-206ENST00000564709 BAHD1Q8TBE0 780 aaPredicted RBP20.7■□□□□ 0.9
SPSB3-206ENST00000564709 BPIFA2Q96DR5 249 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms