RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 GIMAP5Q96F15 307 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 ZNF300Q96RE9 604 aaPredicted RBP9.12□□□□□ -0.95
SF3B3-204ENST00000563739 DHRS9Q9BPW9 319 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 FAIM2Q9BWQ8 316 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 C1QTNF3Q9BXJ4 246 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 HDHD5Q9BXW7 423 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 EBPLQ9BY08 206 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 ALG2Q9H553 416 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 BCO1Q9HAY6 547 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 PAQR5Q9NXK6 330 aaPredicted RBP9.12□□□□□ -0.95
SF3B3-204ENST00000563739 TAS2R9Q9NYW1 312 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 AHSPQ9NZD4 102 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 TNPO3Q9Y5L0 923 aaKnown RBP9.12□□□□□ -0.95
SF3B3-204ENST00000563739 A0A087WZY1 265 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 SMAD9O15198 467 aaKnown RBP9.11□□□□□ -0.95
SF3B3-204ENST00000563739 NKX2-2O95096 273 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 VENTXO95231 258 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 SYNGR4O95473 234 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 H6PDO95479 791 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 NGFRP08138 427 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 TIA1P31483 386 aaKnown RBP eCLIP9.11□□□□□ -0.95
SF3B3-204ENST00000563739 STX2P32856 288 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 SFTPDP35247 375 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 NR4A2P43354 598 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 GZMKP49863 264 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 MRPS22P82650 360 aaKnown RBP9.11□□□□□ -0.95
SF3B3-204ENST00000563739 TOMM34Q15785 309 aaPredicted RBP9.11□□□□□ -0.95
SF3B3-204ENST00000563739 STK11Q15831 433 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 DECR1Q16698 335 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 ZSWIM7Q19AV6 140 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 FAM83EQ2M2I3 478 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 CR1LQ2VPA4 569 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 CPTPQ5TA50 214 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 MROH9Q5TGP6 573 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 AGAP6Q5VW22 663 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 TTC19Q6DKK2 380 aaPredicted RBP9.11□□□□□ -0.95
SF3B3-204ENST00000563739 FAM71E1Q6IPT2 247 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 FAM166AQ6J272 317 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 GALNT18Q6P9A2 607 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 TRABD2AQ86V40 505 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 RELL1Q8IUW5 271 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 MUC15Q8N387 334 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 ZNF433Q8N7K0 673 aaPredicted RBP9.11□□□□□ -0.95
SF3B3-204ENST00000563739 ZBTB8AQ96BR9 441 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 ADAD1Q96M93 576 aaKnown RBP9.11□□□□□ -0.95
SF3B3-204ENST00000563739 AMDHD1Q96NU7 426 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 SORCS2Q96PQ0 1159 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 PARD6BQ9BYG5 372 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 TSPYL1Q9H0U9 437 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 CDC42EP4Q9H3Q1 356 aaKnown RBP9.11□□□□□ -0.95
SF3B3-204ENST00000563739 ELOVL6Q9H5J4 265 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 PFDN4Q9NQP4 134 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 SDHAF3Q9NRP4 125 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 NINJ2Q9NZG7 142 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 TXNDC16Q9P2K2 825 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 PSME2Q9UL46 239 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 KCNS2Q9ULS6 477 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 NFU1Q9UMS0 254 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 SLC25A15Q9Y619 301 aa9.11□□□□□ -0.95
SF3B3-204ENST00000563739 VWFP04275 2813 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 LOC100289279A0A1B0GTE1 492 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 A0A1W2PR80 420 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 OR5H1A6NKK0 313 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 A8MT66 165 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 COQ9O75208 318 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 CD40P25942 277 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 RFX3P48380 749 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 RNF144AP50876 292 aaPredicted RBP9.1□□□□□ -0.95
SF3B3-204ENST00000563739 EFNA4P52798 201 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 ZNF117Q03924 483 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 GGTLC2Q14390 218 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 SWI5Q1ZZU3 235 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 ZNF385BQ569K4 471 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 TIMM23BQ5SRD1 257 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.1□□□□□ -0.95
SF3B3-204ENST00000563739 CBLN3Q6UW01 205 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 FCRLAQ7L513 359 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 GSPT2Q8IYD1 628 aaKnown RBP9.1□□□□□ -0.95
SF3B3-204ENST00000563739 LILRA2Q8N149 483 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 ACTRT2Q8TDY3 377 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 ELP4Q96EB1 424 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 SH3YL1Q96HL8 342 aaPredicted RBP9.1□□□□□ -0.95
SF3B3-204ENST00000563739 TBL1XR1Q9BZK7 514 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 ANKZF1Q9H8Y5 726 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 GP6Q9HCN6 339 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 Q9N2J8 555 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 ARGLU1Q9NWB6 273 aaPredicted RBP9.1□□□□□ -0.95
SF3B3-204ENST00000563739 SIRT5Q9NXA8 310 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 TAS2R7Q9NYW3 318 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 VPS29Q9UBQ0 182 aa9.1□□□□□ -0.95
SF3B3-204ENST00000563739 KMT2CQ8NEZ4 4911 aaKnown RBP9.09□□□□□ -0.95
SF3B3-204ENST00000563739 A0A1W2PNR3 127 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 C9JVG2 144 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 PDLIM1O00151 329 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 ETV2O00321 342 aaPredicted RBP9.09□□□□□ -0.95
SF3B3-204ENST00000563739 RGS14O43566 566 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 YES1P07947 543 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 IGFBP1P08833 259 aaPredicted RBP9.09□□□□□ -0.95
SF3B3-204ENST00000563739 IFI6P09912 130 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 HSD3B1P14060 373 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms