RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 SEZ6L2Q6UXD5 910 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 NUFIP2Q7Z417 695 aaKnown RBP16.6■□□□□ 0.25
NME3-204ENST00000563498 ZAR1Q86SH2 424 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 TDRPQ86YL5 185 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 TUSC5Q8IXB3 177 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 CNPY4Q8N129 248 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 CCNYL1Q8N7R7 359 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 SLC16A11Q8NCK7 471 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 NUP43Q8NFH3 380 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 B4GALNT2Q8NHY0 566 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 PIWIL2Q8TC59 973 aaKnown RBP16.6■□□□□ 0.25
NME3-204ENST00000563498 KISS1RQ969F8 398 aaPredicted RBP16.6■□□□□ 0.25
NME3-204ENST00000563498 ZBED6CLQ96FA7 236 aaPredicted RBP16.6■□□□□ 0.25
NME3-204ENST00000563498 SH3YL1Q96HL8 342 aaPredicted RBP16.6■□□□□ 0.25
NME3-204ENST00000563498 BARX1Q9HBU1 254 aaPredicted RBP16.6■□□□□ 0.25
NME3-204ENST00000563498 CCL27Q9Y4X3 112 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 YES1P07947 543 aa16.59■□□□□ 0.25
NME3-204ENST00000563498 SFTPDP35247 375 aa16.59■□□□□ 0.25
NME3-204ENST00000563498 FRKP42685 505 aaPredicted RBP16.59■□□□□ 0.25
NME3-204ENST00000563498 PRKAG1P54619 331 aa16.59■□□□□ 0.25
NME3-204ENST00000563498 BSPH1Q075Z2 132 aa16.59■□□□□ 0.25
NME3-204ENST00000563498 ITGADQ13349 1161 aa16.59■□□□□ 0.25
NME3-204ENST00000563498 TSC22D1Q15714 1073 aa16.59■□□□□ 0.25
NME3-204ENST00000563498 CD226Q15762 336 aa16.59■□□□□ 0.25
NME3-204ENST00000563498 DUSP5Q16690 384 aa16.59■□□□□ 0.25
NME3-204ENST00000563498 EXOSC6Q5RKV6 272 aaKnown RBP16.59■□□□□ 0.25
NME3-204ENST00000563498 FRMD7Q6ZUT3 714 aa16.59■□□□□ 0.25
NME3-204ENST00000563498 CEP112Q8N8E3 955 aa16.59■□□□□ 0.25
NME3-204ENST00000563498 BANPQ8N9N5 519 aa16.59■□□□□ 0.25
NME3-204ENST00000563498 NEUROG1Q92886 237 aa16.59■□□□□ 0.25
NME3-204ENST00000563498 CIDECQ96AQ7 238 aaPredicted RBP16.59■□□□□ 0.25
NME3-204ENST00000563498 TRIM2Q9C040 744 aa16.59■□□□□ 0.25
NME3-204ENST00000563498 YAE1D1Q9NRH1 226 aa16.59■□□□□ 0.25
NME3-204ENST00000563498 ACSS1Q9NUB1 689 aaPredicted RBP16.59■□□□□ 0.25
NME3-204ENST00000563498 DCDC2Q9UHG0 476 aa16.59■□□□□ 0.25
NME3-204ENST00000563498 SEC22BO75396 215 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 CRCPO75575 148 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 PRKD3O94806 890 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 ADAP00813 363 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 ALOX5P09917 674 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 SHC1P29353 583 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 PRIM2P49643 509 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 FOXF1Q12946 379 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 FCRLAQ7L513 359 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 SSX8Q7RTT4 187 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 MTERF4Q7Z6M4 381 aaKnown RBP16.58■□□□□ 0.24
NME3-204ENST00000563498 PHC2Q8IXK0 858 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 SLC43A2Q8N370 569 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 COX18Q8N8Q8 333 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 KBTBD8Q8NFY9 601 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 TMEM158Q8WZ71 300 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 PPCDCQ96CD2 204 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 CCT7Q99832 543 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 KLHDC3Q9BQ90 382 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 TRAF4Q9BUZ4 470 aaPredicted RBP16.58■□□□□ 0.24
NME3-204ENST00000563498 SRXN1Q9BYN0 137 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 REEP4Q9H6H4 257 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 L2HGDHQ9H9P8 463 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 FAIMQ9NVQ4 179 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 ACTL7BQ9Y614 415 aa16.58■□□□□ 0.24
NME3-204ENST00000563498 DPRXA6NFQ7 191 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 A8MV72 311 aaPredicted RBP16.57■□□□□ 0.24
NME3-204ENST00000563498 G3V2L1 256 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 GOLGA8RI6L899 631 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 KIF2AO00139 706 aaPredicted RBP16.57■□□□□ 0.24
NME3-204ENST00000563498 EFNA2O43921 213 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 ADAM11O75078 769 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 UROSP10746 265 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 MYL2P10916 166 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 SUMO3P55854 103 aaPredicted RBP16.57■□□□□ 0.24
NME3-204ENST00000563498 ZNF117Q03924 483 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 FAPQ12884 760 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 PDE7AQ13946 482 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 WHAMMP3Q1A5X7 153 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 CHRFAM7AQ494W8 412 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 ANKRD26P1Q6NSI1 321 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 ZYG11AQ6WRX3 759 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 Q6ZT83 130 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 SZRD1Q7Z422 152 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 ATG4DQ86TL0 474 aaPredicted RBP16.57■□□□□ 0.24
NME3-204ENST00000563498 DTX2Q86UW9 622 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 ZNF619Q8N2I2 560 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 C17orf53Q8N3J3 647 aaPredicted RBP16.57■□□□□ 0.24
NME3-204ENST00000563498 FBXO30Q8TB52 745 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 FCRL1Q96LA6 429 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 HS6ST2Q96MM7 605 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 BTBD2Q9BX70 525 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 ALG2Q9H553 416 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 BCO1Q9HAY6 547 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 C1orf109Q9NX04 203 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 GIN1Q9NXP7 522 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 EMCNQ9ULC0 261 aa16.57■□□□□ 0.24
NME3-204ENST00000563498 GPC6Q9Y625 555 aaPredicted RBP16.57■□□□□ 0.24
NME3-204ENST00000563498 ZNF814B7Z6K7 855 aa16.56■□□□□ 0.24
NME3-204ENST00000563498 ZNF195O14628 629 aa16.56■□□□□ 0.24
NME3-204ENST00000563498 NTN1O95631 604 aa16.56■□□□□ 0.24
NME3-204ENST00000563498 CD8AP01732 235 aa16.56■□□□□ 0.24
NME3-204ENST00000563498 PYGBP11216 843 aa16.56■□□□□ 0.24
NME3-204ENST00000563498 NRF1Q16656 503 aa16.56■□□□□ 0.24
NME3-204ENST00000563498 ZNF385BQ569K4 471 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms