RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 HAUS5O94927 633 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 PSMG1O95456 288 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 TDP2O95551 362 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 LINC00614P0C842 121 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 PET100P0DJ07 73 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 ATP1B2P14415 290 aaPredicted RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 PSMC3P17980 439 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 FSTP19883 344 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 DCKP27707 260 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 OTX1P32242 354 aaPredicted RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 RAE1P78406 368 aaKnown RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 SELENBP1Q13228 472 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 TMED2Q15363 201 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 ZNF790Q6PG37 636 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 ABHD13Q7L211 337 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 MEPCEQ7L2J0 689 aaKnown RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 LYG2Q86SG7 212 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 NAXDQ8IW45 347 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 SPAG16Q8N0X2 631 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 PGAM4Q8N0Y7 254 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 SYS1Q8N2H4 156 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 PELI3Q8N2H9 469 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 OR52E5Q8NH55 327 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 OR52I2Q8NH67 350 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 EME1Q96AY2 570 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 FAM136AQ96C01 138 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 MRPL53Q96EL3 112 aaKnown RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 SERPINB12Q96P63 405 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 MS4A10Q96PG2 267 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 MAP3K3Q99759 626 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 TIMM29Q9BSF4 260 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 ULBP1Q9BZM6 244 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 ACTR6Q9GZN1 396 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 ATXN3LQ9H3M9 355 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 RNF41Q9H4P4 317 aaPredicted RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 UGT1A7Q9HAW7 530 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 UGT1A8Q9HAW9 530 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 ANKHQ9HCJ1 492 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 PHPT1Q9NRX4 125 aaPredicted RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 SMPXQ9UHP9 88 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 FKBP7Q9Y680 259 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 MROH7Q68CQ1 1323 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 KIF20BQ96Q89 1820 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 TEX51A0A1B0GUA7 166 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 RNF222A6NCQ9 220 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 EFCAB7A8K855 629 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 PCDH7O60245 1069 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 CTDNEP1O95476 244 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 SERPINA1P01009 418 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 HOXC6P09630 235 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 CT62P0C5K7 136 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 GJB2P29033 226 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 CRYBA4P53673 196 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 ZP1P60852 638 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 SIRPAP78324 504 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 DBPQ10586 325 aaPredicted RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 HNF4GQ14541 408 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 NFATC4Q14934 902 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 MGAT5BQ3V5L5 792 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 UTF1Q5T230 341 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 FAM46CQ5VWP2 391 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 H3F3CQ6NXT2 135 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 CYHR1Q6ZMK1 362 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 PRUNE1Q86TP1 453 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 WDFY1Q8IWB7 410 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.39□□□□□ -1.71
SMG1-207ENST00000563235 ZNF561Q8N587 486 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 NECAP1Q8NC96 275 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 OR4K2Q8NGD2 314 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 OR5AN1Q8NGI8 311 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 AGAP11Q8TF27 550 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 ABTB1Q969K4 478 aaPredicted RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 XPO6Q96QU8 1125 aaKnown RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 RNF2Q99496 336 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 ZNF426Q9BUY5 554 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 MARCH7Q9H992 704 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 HRASLSQ9HDD0 168 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 TIGARQ9NQ88 270 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 PAK5Q9P286 719 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 NKX1-2Q9UD57 310 aaPredicted RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 PADI3Q9ULW8 664 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 SLC6A5Q9Y345 797 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 NUBP2Q9Y5Y2 271 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 PIK3C2AO00443 1686 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 A0A1W2PPK0 400 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 CCT8L1PA6NM43 557 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 GPR25O00155 361 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 GOSR2O14653 212 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 PRKRAO75569 313 aaKnown RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 VNN1O95497 513 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 CYB5R3P00387 301 aaPredicted RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 EPOP01588 193 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 RAP2AP10114 183 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 ZNF182P17025 639 aaPredicted RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 APEX1P27695 318 aaKnown RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 ADORA2AP29274 412 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 EPHA3P29320 983 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 S100A7P31151 101 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 CDK9P50750 372 aaKnown RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 DUSP3P51452 185 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms