RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 RPL14P50914 215 aaKnown RBP9.23□□□□□ -0.93
CLK3-205ENST00000561673 ZNF41P51814 821 aaPredicted RBP9.23□□□□□ -0.93
CLK3-205ENST00000561673 RAC1P63000 192 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 ZNF117Q03924 483 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 POU4F3Q15319 338 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 SMU1Q2TAY7 513 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 CTU2Q2VPK5 515 aaKnown RBP9.23□□□□□ -0.93
CLK3-205ENST00000561673 TNFAIP8L3Q5GJ75 292 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 DCST2Q5T1A1 773 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.23□□□□□ -0.93
CLK3-205ENST00000561673 DMRTA1Q5VZB9 504 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 PPP4R4Q6NUP7 873 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 CBLN3Q6UW01 205 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 PAMR1Q6UXH9 720 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 FAM214BQ7L5A3 538 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 CAMKMTQ7Z624 323 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 MTERF4Q7Z6M4 381 aaKnown RBP9.23□□□□□ -0.93
CLK3-205ENST00000561673 CLEC4FQ8N1N0 589 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 ZNF610Q8N9Z0 462 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 ZNF527Q8NB42 609 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 OR10D3Q8NH80 312 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 PHOSPHO1Q8TCT1 267 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 SFXN5Q8TD22 340 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 MOAP1Q96BY2 351 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 MBD6Q96DN6 1003 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 ZIM3Q96PE6 472 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 OR7D2Q96RA2 312 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 SORT1Q99523 831 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 SLC39A3Q9BRY0 314 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 HOXD1Q9GZZ0 328 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 CENPHQ9H3R5 247 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 TMEM185BQ9H7F4 350 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 NEUROD4Q9HD90 331 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 ELOVL5Q9NYP7 299 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.23□□□□□ -0.93
CLK3-205ENST00000561673 RAP2CQ9Y3L5 183 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 TESMINQ9Y4I5 508 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 MED12LQ86YW9 2145 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 A0A0J9YW62 118 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 NPIPB9F8W1W9 429 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 OIP5O43482 229 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 EFNA2O43921 213 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 CXCL13O43927 109 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 RAF1P04049 648 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 KRT16P08779 473 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 MYZAPP0CAP1 466 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 CD8BP10966 210 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 FCGR2AP12318 317 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 POU2F1P14859 743 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 BGNP21810 368 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 MATN1P21941 496 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 KCNJ5P48544 419 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 ATP12AP54707 1039 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 RPS26P62854 115 aaKnown RBP9.22□□□□□ -0.93
CLK3-205ENST00000561673 FGFBP1Q14512 234 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 CEP85LQ5SZL2 805 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 OR4F3Q6IEY1 312 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 ESPNLQ6ZVH7 1005 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 C6orf120Q7Z4R8 191 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 CLECL1Q8IZS7 167 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 LILRA2Q8N149 483 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 OR5D16Q8NGK9 328 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 OR2V1Q8NHB1 315 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 GPR119Q8TDV5 335 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 OSTF1Q92882 214 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 ALPK1Q96QP1 1244 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 PRRG4Q9BZD6 226 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 SERHL2Q9H4I8 314 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 KCNK9Q9NPC2 374 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 PLSCR4Q9NRQ2 329 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 PAQR5Q9NXK6 330 aaPredicted RBP9.22□□□□□ -0.93
CLK3-205ENST00000561673 KLHL28Q9NXS3 571 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 C6orf203Q9P0P8 240 aaPredicted RBP9.22□□□□□ -0.93
CLK3-205ENST00000561673 ICAM5Q9UMF0 924 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 CLEC4AQ9UMR7 237 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 PROCRQ9UNN8 238 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 CARD8Q9Y2G2 431 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 SETD2Q9BYW2 2564 aaPredicted RBP9.22□□□□□ -0.93
CLK3-205ENST00000561673 AKAP6Q13023 2319 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 MPDZO75970 2070 aa9.22□□□□□ -0.93
CLK3-205ENST00000561673 NIPBLQ6KC79 2804 aaeCLIP9.22□□□□□ -0.93
CLK3-205ENST00000561673 C16orf97H3BN30 126 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 H3BNH8 94 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 GTPBP1O00178 669 aaKnown RBP9.21□□□□□ -0.94
CLK3-205ENST00000561673 RNASET2O00584 256 aaKnown RBP9.21□□□□□ -0.94
CLK3-205ENST00000561673 ZNF195O14628 629 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 SIAH2O43255 324 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 SCN2BO60939 215 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 SS18L1O75177 396 aaPredicted RBP9.21□□□□□ -0.94
CLK3-205ENST00000561673 SNUPNO95149 360 aaKnown RBP9.21□□□□□ -0.94
CLK3-205ENST00000561673 NUDT14O95848 222 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 PLGP00747 810 aaPredicted RBP9.21□□□□□ -0.94
CLK3-205ENST00000561673 CD99P14209 185 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 ME2P23368 584 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 SHC1P29353 583 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 CCKARP32238 428 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 SOAT1P35610 550 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 EIF1P41567 113 aaKnown RBP9.21□□□□□ -0.94
CLK3-205ENST00000561673 P2RX1P51575 399 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 CASP9P55211 416 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms