RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 ZNF781Q8N8C0 355 aa6.66□□□□□ -1.34
ZEB1-223ENST00000561304 CDRT4Q8N9R6 151 aa6.66□□□□□ -1.34
ZEB1-223ENST00000561304 FNDC5Q8NAU1 212 aa6.66□□□□□ -1.34
ZEB1-223ENST00000561304 OR5AK3PQ8NH89 298 aa6.66□□□□□ -1.34
ZEB1-223ENST00000561304 ZFP28Q8NHY6 868 aa6.66□□□□□ -1.34
ZEB1-223ENST00000561304 FNDC9Q8TBE3 224 aa6.66□□□□□ -1.34
ZEB1-223ENST00000561304 POC1BQ8TC44 478 aa6.66□□□□□ -1.34
ZEB1-223ENST00000561304 FAM222BQ8WU58 562 aa6.66□□□□□ -1.34
ZEB1-223ENST00000561304 STARD4Q96DR4 205 aa6.66□□□□□ -1.34
ZEB1-223ENST00000561304 MTERF3Q96E29 417 aa6.66□□□□□ -1.34
ZEB1-223ENST00000561304 DMRTB1Q96MA1 342 aa6.66□□□□□ -1.34
ZEB1-223ENST00000561304 SORT1Q99523 831 aa6.66□□□□□ -1.34
ZEB1-223ENST00000561304 TMEM109Q9BVC6 243 aa6.66□□□□□ -1.34
ZEB1-223ENST00000561304 RBM24Q9BX46 236 aaKnown RBP6.66□□□□□ -1.34
ZEB1-223ENST00000561304 PINK1Q9BXM7 581 aa6.66□□□□□ -1.34
ZEB1-223ENST00000561304 PARD6BQ9BYG5 372 aa6.66□□□□□ -1.34
ZEB1-223ENST00000561304 SERHL2Q9H4I8 314 aa6.66□□□□□ -1.34
ZEB1-223ENST00000561304 EML4Q9HC35 981 aaKnown RBP6.66□□□□□ -1.34
ZEB1-223ENST00000561304 ZCCHC3Q9NUD5 404 aaKnown RBP6.66□□□□□ -1.34
ZEB1-223ENST00000561304 CCM2LQ9NUG4 571 aaPredicted RBP6.66□□□□□ -1.34
ZEB1-223ENST00000561304 GPATCH2Q9NW75 528 aa6.66□□□□□ -1.34
ZEB1-223ENST00000561304 ST6GALNAC2Q9UJ37 374 aa6.66□□□□□ -1.34
ZEB1-223ENST00000561304 PLEKHA6Q9Y2H5 1048 aa6.66□□□□□ -1.34
ZEB1-223ENST00000561304 FLNAP21333 2647 aaKnown RBP6.65□□□□□ -1.34
ZEB1-223ENST00000561304 CENPVL1A0A0U1RR11 272 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 A0A1W2PRB8 838 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 TUBAL3A6NHL2 446 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 TTC36A6NLP5 189 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 A8MXE2 369 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 EIF4EBP3O60516 100 aaPredicted RBP6.65□□□□□ -1.35
ZEB1-223ENST00000561304 AQP8O94778 261 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 CGAP01215 116 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 C1QCP02747 245 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 OPN1LWP04000 364 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 NGFRP08138 427 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 ALOX5P09917 674 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 DHRS4L1P0CG22 281 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 G6PDP11413 515 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 IL11P20809 199 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 TBXA2RP21731 343 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 PSMA4P25789 261 aaKnown RBP6.65□□□□□ -1.35
ZEB1-223ENST00000561304 SHC1P29353 583 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 SERPINB5P36952 375 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 KIR2DL2P43627 348 aaPredicted RBP6.65□□□□□ -1.35
ZEB1-223ENST00000561304 SLC6A8P48029 635 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 CPA2P48052 419 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 PRIM2P49643 509 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 PSMD4P55036 377 aaKnown RBP6.65□□□□□ -1.35
ZEB1-223ENST00000561304 DIO3P55073 304 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 RPS26P62854 115 aaKnown RBP6.65□□□□□ -1.35
ZEB1-223ENST00000561304 C17orf67Q0P5P2 114 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 TP53BP2Q13625 1128 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 DAZAP2Q15038 168 aaPredicted RBP6.65□□□□□ -1.35
ZEB1-223ENST00000561304 PON3Q15166 354 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 CHI3L2Q15782 390 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 PDCD2Q16342 344 aaPredicted RBP6.65□□□□□ -1.35
ZEB1-223ENST00000561304 BCL2A1Q16548 175 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 CTU2Q2VPK5 515 aaKnown RBP6.65□□□□□ -1.35
ZEB1-223ENST00000561304 PLPPR5Q32ZL2 321 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 NDUFAF6Q330K2 333 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 TNFAIP8L3Q5GJ75 292 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.65□□□□□ -1.355e-6■■□□□ 13.9
ZEB1-223ENST00000561304 ZNF474Q6S9Z5 364 aaPredicted RBP6.65□□□□□ -1.35
ZEB1-223ENST00000561304 C22orf34Q6ZV56 151 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 OLIG3Q7RTU3 272 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 P4HA3Q7Z4N8 544 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 CLECL1Q8IZS7 167 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 METTL25Q8N6Q8 603 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 COX18Q8N8Q8 333 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 CNEP1R1Q8N9A8 125 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 OR5D16Q8NGK9 328 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 CEP70Q8NHQ1 597 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 PSMA8Q8TAA3 256 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 JADE3Q92613 823 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 ARSGQ96EG1 525 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 SH3YL1Q96HL8 342 aaPredicted RBP6.65□□□□□ -1.35
ZEB1-223ENST00000561304 ADGRG7Q96K78 797 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 PPP3R2Q96LZ3 170 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 ZFP3Q96NJ6 502 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 ZIM3Q96PE6 472 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 OPN3Q9H1Y3 402 aaPredicted RBP6.65□□□□□ -1.35
ZEB1-223ENST00000561304 RNF122Q9H9V4 155 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 C3orf14Q9HBI5 128 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 SDHAF3Q9NRP4 125 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 GIN1Q9NXP7 522 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 MRTO4Q9UKD2 239 aaKnown RBP6.65□□□□□ -1.35
ZEB1-223ENST00000561304 PACSIN3Q9UKS6 424 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 TESMINQ9Y4I5 508 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 SNX8Q9Y5X2 465 aa6.65□□□□□ -1.35
ZEB1-223ENST00000561304 SH3D21A4FU49 640 aa6.64□□□□□ -1.35
ZEB1-223ENST00000561304 TMEM114B3SHH9 223 aa6.64□□□□□ -1.35
ZEB1-223ENST00000561304 NPIPB9F8W1W9 429 aa6.64□□□□□ -1.35
ZEB1-223ENST00000561304 RGS16O15492 202 aaPredicted RBP6.64□□□□□ -1.35
ZEB1-223ENST00000561304 ZNF500O60304 480 aaPredicted RBP6.64□□□□□ -1.35
ZEB1-223ENST00000561304 HSPA4LO95757 839 aa6.64□□□□□ -1.35
ZEB1-223ENST00000561304 HRGP04196 525 aa6.64□□□□□ -1.35
ZEB1-223ENST00000561304 ZNF17P17021 662 aa6.64□□□□□ -1.35
ZEB1-223ENST00000561304 BGNP21810 368 aa6.64□□□□□ -1.35
ZEB1-223ENST00000561304 MAPK1P28482 360 aa6.64□□□□□ -1.35
ZEB1-223ENST00000561304 CCT3P49368 545 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms