RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 C10orf105Q8TEF2 133 aa15.78■□□□□ 0.12
TSPAN3-208ENST00000560514 MRPL57Q9BQC6 102 aaKnown RBP15.78■□□□□ 0.12
TSPAN3-208ENST00000560514 LMF2Q9BU23 707 aaKnown RBP15.78■□□□□ 0.12
TSPAN3-208ENST00000560514 MIEF1Q9NQG6 463 aa15.78■□□□□ 0.12
TSPAN3-208ENST00000560514 PLCE1Q9P212 2302 aa15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 MYO1GB0I1T2 1018 aa15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 ALG1L2C9J202 215 aa15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 UPK1AO00322 258 aa15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 MANBAO00462 879 aa15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 SPRY1O43609 319 aaPredicted RBP15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 OR4F21O95013 312 aa15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 GGT1P19440 569 aa15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 PSMA4P25789 261 aaKnown RBP15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 EIF1P41567 113 aaKnown RBP15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 GSTM5P46439 218 aa15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 C2orf80Q0P641 193 aa15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 SLC29A2Q14542 456 aa15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 TIMM23BQ5SRD1 257 aa15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 C11orf71Q6IPW1 123 aa15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 C12orf54Q6X4T0 127 aa15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 Q6ZSR9 355 aa15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 P2RY8Q86VZ1 359 aa15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 PLD6Q8N2A8 252 aaKnown RBP15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 OR2L13Q8N349 312 aa15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 SLC43A2Q8N370 569 aa15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 GPR151Q8TDV0 419 aa15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 SH3YL1Q96HL8 342 aaPredicted RBP15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 FMO2Q99518 471 aa15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 NPAS1Q99742 590 aa15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 EBPLQ9BY08 206 aa15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 GRID1Q9ULK0 1009 aa15.77■□□□□ 0.12
TSPAN3-208ENST00000560514 SVEP1Q4LDE5 3571 aa15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 GXYLT2A0PJZ3 443 aa15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 ZNF814B7Z6K7 855 aa15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 PPP6CO00743 305 aa15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 ULK1O75385 1050 aa15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 OXSR1O95747 527 aaPredicted RBP15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 RPS17P08708 135 aaKnown RBP15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 DDCP20711 480 aa15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 HMOX2P30519 316 aa15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 TIA1P31483 386 aaKnown RBP eCLIP15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 RAE1P78406 368 aaKnown RBP15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 BTKQ06187 659 aa15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 GGTLC2Q14390 218 aa15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 VPS26BQ4G0F5 336 aa15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 KLHL17Q6TDP4 642 aa15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 MISPQ8IVT2 679 aa15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 ZNF483Q8TF39 744 aaPredicted RBP15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 PIK3R3Q92569 461 aa15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 C1QTNF3Q9BXJ4 246 aa15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 SRXN1Q9BYN0 137 aa15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 PLA2G12AQ9BZM1 189 aa15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 C12orf65Q9H3J6 166 aaKnown RBP15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 CDC42EP4Q9H3Q1 356 aaKnown RBP15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 EQTNQ9NQ60 294 aa15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 KLHL9Q9P2J3 617 aa15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 PMF1-BGLAPU3KQ54 211 aa15.76■□□□□ 0.11
TSPAN3-208ENST00000560514 E7EQL1 145 aa15.75■□□□□ 0.11
TSPAN3-208ENST00000560514 H7C417 338 aa15.75■□□□□ 0.11
TSPAN3-208ENST00000560514 TCF21O43680 179 aa15.75■□□□□ 0.11
TSPAN3-208ENST00000560514 ANXA4P09525 319 aaPredicted RBP15.75■□□□□ 0.11
TSPAN3-208ENST00000560514 DHRS4L1P0CG22 281 aa15.75■□□□□ 0.11
TSPAN3-208ENST00000560514 CHN1P15882 459 aa15.75■□□□□ 0.11
TSPAN3-208ENST00000560514 PTAFRP25105 342 aa15.75■□□□□ 0.11
TSPAN3-208ENST00000560514 ELK4P28324 431 aa15.75■□□□□ 0.11
TSPAN3-208ENST00000560514 EFNA4P52798 201 aa15.75■□□□□ 0.11
TSPAN3-208ENST00000560514 MANFP55145 182 aaKnown RBP15.75■□□□□ 0.11
TSPAN3-208ENST00000560514 CHRNB3Q05901 458 aa15.75■□□□□ 0.11
TSPAN3-208ENST00000560514 RASA2Q15283 850 aa15.75■□□□□ 0.11
TSPAN3-208ENST00000560514 UBAP2Q5T6F2 1119 aaKnown RBP15.75■□□□□ 0.11
TSPAN3-208ENST00000560514 TIFABQ6ZNK6 161 aa15.75■□□□□ 0.11
TSPAN3-208ENST00000560514 LCA5Q86VQ0 697 aa15.75■□□□□ 0.11
TSPAN3-208ENST00000560514 B4GALNT2Q8NHY0 566 aa15.75■□□□□ 0.11
TSPAN3-208ENST00000560514 IFT81Q8WYA0 676 aa15.75■□□□□ 0.11
TSPAN3-208ENST00000560514 ELP4Q96EB1 424 aa15.75■□□□□ 0.11
TSPAN3-208ENST00000560514 APIPQ96GX9 242 aa15.75■□□□□ 0.11
TSPAN3-208ENST00000560514 PAFAH2Q99487 392 aa15.75■□□□□ 0.11
TSPAN3-208ENST00000560514 MRPL46Q9H2W6 279 aaKnown RBP15.75■□□□□ 0.11
TSPAN3-208ENST00000560514 PRSS50Q9UI38 385 aa15.75■□□□□ 0.11
TSPAN3-208ENST00000560514 HEATR1Q9H583 2144 aaKnown RBP15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 A0A087WUV0 522 aaPredicted RBP15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 SLC35F4A4IF30 521 aa15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 SCDO00767 359 aa15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 PSMG1O95456 288 aa15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 NUDT14O95848 222 aa15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 IGKV1D-16P01601 117 aa15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 NGFRP08138 427 aa15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 SNRPAP09012 282 aaKnown RBP15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 APEHP13798 732 aaKnown RBP15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 OR3A2P47893 321 aa15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 CLCQ05315 142 aa15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 ZNF763Q0D2J5 394 aa15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 TMEM151AQ8N4L1 468 aa15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 RFLNBQ8N5W9 214 aa15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 OR4C3Q8NH37 302 aa15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 POC1BQ8TC44 478 aa15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 METTL6Q8TCB7 284 aa15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 C3orf49Q96BT1 292 aa15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 PIMREGQ9BSJ6 248 aa15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 ACPTQ9BZG2 426 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms