RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 BOLA1Q9Y3E2 137 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 TRAPPC13A5PLN9 417 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 HCRTR1O43613 425 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 CLUP10909 449 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 TLX1P31314 330 aaPredicted RBP9.32□□□□□ -0.92
LRRC28-216ENST00000559819 KIR2DS3Q14952 304 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 ALG11Q2TAA5 492 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 ZNF542PQ5EBM4 170 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 NIPAL3Q6P499 406 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 TRIM48Q8IWZ4 208 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 GDPD1Q8N9F7 314 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 TMEM239Q8WW34 195 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 TIMP4Q99727 224 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 RBCK1Q9BYM8 510 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 NKX2-4Q9H2Z4 354 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 MED17Q9NVC6 651 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 MAT2BQ9NZL9 334 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 F5P12259 2224 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 TRAV27A0A087WT01 109 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 CCDC182A6NF36 153 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 E9PI62 339 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 J3QRE1 110 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 BHLHE40O14503 412 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 RNF13O43567 381 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 IDH3BO43837 385 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 RFPL3O75679 317 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 AGR2O95994 175 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 CELA2BP08218 269 aaPredicted RBP9.32□□□□□ -0.92
LRRC28-216ENST00000559819 SLC16A1P53985 500 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 PPP3R1P63098 170 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 HYAL1Q12794 435 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 IL18Q14116 193 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 EIPR1Q53HC9 387 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 IL20RBQ6UXL0 311 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 NR2C2APQ86WQ0 139 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 ZNF614Q8N883 585 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 OR52N1Q8NH53 320 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 BRIX1Q8TDN6 353 aaKnown RBP9.32□□□□□ -0.92
LRRC28-216ENST00000559819 TP53INP1Q96A56 240 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 SLC22A18Q96BI1 424 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 RIPOR3Q96MK2 946 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 HS6ST2Q96MM7 605 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 CD180Q99467 661 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 GAS2L1Q99501 681 aaPredicted RBP9.32□□□□□ -0.92
LRRC28-216ENST00000559819 TTYH2Q9BSA4 534 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 ALG8Q9BVK2 526 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 OR51V1Q9H2C8 321 aa9.32□□□□□ -0.92
LRRC28-216ENST00000559819 SGK494L7N484 410 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 TNFSF14O43557 240 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 STX11O75558 287 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 HLA-DPB1P04440 258 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 HMGN1P05114 100 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 SLC2A2P11168 524 aaPredicted RBP9.31□□□□□ -0.92
LRRC28-216ENST00000559819 CHRNB1P11230 501 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 RPS4Y1P22090 263 aaKnown RBP9.31□□□□□ -0.92
LRRC28-216ENST00000559819 NOS3P29474 1203 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 GABRA3P34903 492 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 SRP54P61011 504 aaKnown RBP9.31□□□□□ -0.92
LRRC28-216ENST00000559819 RPS7P62081 194 aaKnown RBP9.31□□□□□ -0.92
LRRC28-216ENST00000559819 SHHQ15465 462 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 FAM27D1Q5T7N8 215 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 ABHD13Q7L211 337 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 MEPCEQ7L2J0 689 aaKnown RBP9.31□□□□□ -0.92
LRRC28-216ENST00000559819 Q8N402 240 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 CAMKVQ8NCB2 501 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 GALNT6Q8NCL4 622 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 OR10H4Q8NGA5 316 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 OR51A7Q8NH64 312 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 UBASH3BQ8TF42 649 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 DNAJA4Q8WW22 397 aaPredicted RBP9.31□□□□□ -0.92
LRRC28-216ENST00000559819 KISS1RQ969F8 398 aaPredicted RBP9.31□□□□□ -0.92
LRRC28-216ENST00000559819 FYTTD1Q96QD9 318 aaKnown RBP9.31□□□□□ -0.92
LRRC28-216ENST00000559819 ZFYVE21Q9BQ24 234 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 IFT27Q9BW83 186 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 TTTY10Q9BZA0 68 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 PPIL3Q9H2H8 161 aaKnown RBP9.31□□□□□ -0.92
LRRC28-216ENST00000559819 PPP1R3EQ9H7J1 279 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 USP36Q9P275 1121 aaKnown RBP9.31□□□□□ -0.92
LRRC28-216ENST00000559819 FBXL4Q9UKA2 621 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 CDHR4A6H8M9 788 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 GTPBP1O00178 669 aaKnown RBP9.31□□□□□ -0.92
LRRC28-216ENST00000559819 DBIP07108 87 aaKnown RBP9.31□□□□□ -0.92
LRRC28-216ENST00000559819 THBS1P07996 1170 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 NID1P14543 1247 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 PAICSP22234 425 aaKnown RBP9.31□□□□□ -0.92
LRRC28-216ENST00000559819 MYL9P24844 172 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 CTBP2P56545 445 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 DLX2Q07687 328 aaPredicted RBP9.31□□□□□ -0.92
LRRC28-216ENST00000559819 MGAT2Q10469 447 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 TMEM44Q2T9K0 475 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 PRICKLE4Q2TBC4 344 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 DEFB110Q30KQ9 67 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 LCN1P1Q5VSP4 162 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 TICRRQ7Z2Z1 1910 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 ZNF438Q7Z4V0 828 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 RDH10Q8IZV5 341 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 CA13Q8N1Q1 262 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 VWA5B2Q8N398 1253 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 CYB561A3Q8NBI2 242 aa9.31□□□□□ -0.92
LRRC28-216ENST00000559819 SLC37A3Q8NCC5 494 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms