RNA–Protein interactions for RNA: ENST00000558954.5

RABGGTA-208, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-208ENST00000558954 GXYLT1Q4G148 440 aa17.12■□□□□ 0.33
RABGGTA-208ENST00000558954 RUNDC3AQ59EK9 446 aa17.12■□□□□ 0.33
RABGGTA-208ENST00000558954 GCNT6Q5T4J0 391 aa17.12■□□□□ 0.33
RABGGTA-208ENST00000558954 REP15Q6BDI9 236 aa17.12■□□□□ 0.33
RABGGTA-208ENST00000558954 VASNQ6EMK4 673 aa17.12■□□□□ 0.33
RABGGTA-208ENST00000558954 ENPP6Q6UWR7 440 aa17.12■□□□□ 0.33
RABGGTA-208ENST00000558954 EIF3MQ7L2H7 374 aaKnown RBP17.12■□□□□ 0.33
RABGGTA-208ENST00000558954 MTDHQ86UE4 582 aaKnown RBP17.12■□□□□ 0.33
RABGGTA-208ENST00000558954 PM20D2Q8IYS1 436 aa17.12■□□□□ 0.33
RABGGTA-208ENST00000558954 PCYOX1LQ8NBM8 494 aa17.12■□□□□ 0.33
RABGGTA-208ENST00000558954 OR5M9Q8NGP3 310 aa17.12■□□□□ 0.33
RABGGTA-208ENST00000558954 TMEM19Q96HH6 336 aa17.12■□□□□ 0.33
RABGGTA-208ENST00000558954 TREX2Q9BQ50 279 aaPredicted RBP17.12■□□□□ 0.33
RABGGTA-208ENST00000558954 QRSL1Q9H0R6 528 aaKnown RBP17.12■□□□□ 0.33
RABGGTA-208ENST00000558954 IKZF5Q9H5V7 419 aa17.12■□□□□ 0.33
RABGGTA-208ENST00000558954 MTHFD2LQ9H903 347 aaPredicted RBP17.12■□□□□ 0.33
RABGGTA-208ENST00000558954 SLC35A3Q9Y2D2 325 aa17.12■□□□□ 0.33
RABGGTA-208ENST00000558954 MEMO1Q9Y316 297 aa17.12■□□□□ 0.33
RABGGTA-208ENST00000558954 DSPPQ9NZW4 1301 aa17.12■□□□□ 0.33
RABGGTA-208ENST00000558954 SPTAN1Q13813 2472 aaKnown RBP17.12■□□□□ 0.33
RABGGTA-208ENST00000558954 INTS1Q8N201 2190 aaKnown RBP17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 C5orf58C9J3I9 102 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 E9PLN8 166 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 LINC01387J3KSC0 135 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 EIF4E2O60573 245 aaKnown RBP17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 NUDT14O95848 222 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 NPPAP01160 153 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 NUDT7P0C024 238 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 ARAFP10398 606 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 ZNF17P17021 662 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 RPS4Y1P22090 263 aaKnown RBP17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 CHMP24386 653 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 ACVR2AP27037 513 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 P2RX1P51575 399 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 MAPK11Q15759 364 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 MAPK14Q16539 360 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 EMC4Q5J8M3 183 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 PRAMEF8Q5VWM4 474 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 PRAMEF7Q5VXH5 474 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 ZNF585AQ6P3V2 769 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 CBLN3Q6UW01 205 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 ARSKQ6UWY0 536 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 C3P1Q6ZMU1 363 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 CMIPQ8IY22 773 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 PEX5LQ8IYB4 626 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 TOR1AIP2Q8NFQ8 470 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 RP9Q8TA86 221 aaKnown RBP17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 SSC4DQ8WTU2 575 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 ZBTB8AQ96BR9 441 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 TIMP4Q99727 224 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 VKORC1Q9BQB6 163 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 PIGQQ9BRB3 760 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 PRDM14Q9GZV8 571 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 CACYBPQ9HB71 228 aaKnown RBP17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 ICAM5Q9UMF0 924 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 VDAC3Q9Y277 283 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 CARD8Q9Y2G2 431 aa17.11■□□□□ 0.33
RABGGTA-208ENST00000558954 PTPN13Q12923 2485 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 A0A0G2JPF8 293 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 LOC100653049A0A140TA62 436 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 C7orf72A4D263 438 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 HNRNPCL2B2RXH8 293 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 HNRNPCL3B7ZW38 293 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 HNRNPCL1O60812 293 aaKnown RBP17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 KRT34O76011 436 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 DBIP07108 87 aaKnown RBP17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 UBTFL6P0CB48 400 aaPredicted RBP17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 HNRNPCL4P0DMR1 293 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 GABRA1P14867 456 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 IL7RP16871 459 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 PTGER4P35408 488 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 CCR4P51679 360 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 MTPNP58546 118 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 SKP2Q13309 424 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 CYP51A1Q16850 503 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 PLPPR5Q32ZL2 321 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 NDUFAF6Q330K2 333 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 DCST1Q5T197 706 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 METTL25Q8N6Q8 603 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 FAM71CQ8NEG0 241 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 BBS10Q8TAM1 723 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 PHF10Q8WUB8 498 aaKnown RBP17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 WDR60Q8WVS4 1066 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 MAL2Q969L2 176 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 ZG16BQ96DA0 208 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 THUMPD3Q9BV44 507 aaKnown RBP17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 CCDC106Q9BWC9 280 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 LAT2Q9GZY6 243 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 ARL2BPQ9Y2Y0 163 aa17.1■□□□□ 0.33
RABGGTA-208ENST00000558954 ICE1Q9Y2F5 2266 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 FXYD1O00168 92 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 OIP5O43482 229 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 SHOX2O60902 331 aaPredicted RBP17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 CYP7B1O75881 506 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 LDLRP01130 860 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 HOXD4P09016 255 aaPredicted RBP17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 NID1P14543 1247 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 B3GALT5-AS1P59052 145 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 KCNJ10P78508 379 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms