RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 CHMP24386 653 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 ADSLP30566 484 aaPredicted RBP11.19□□□□□ -0.62
SMAD3-205ENST00000558428 STARP49675 285 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 P2RX1P51575 399 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 CCR4P51679 360 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 SMSP52788 366 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 CRISP3P54108 245 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 B3GALT5-AS1P59052 145 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 ADORA2A-AS1P86434 159 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 SRYQ05066 204 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 FGFBP1Q14512 234 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 MAPRE2Q15555 327 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 MAPK14Q16539 360 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 GLYR1Q49A26 553 aaPredicted RBP11.19□□□□□ -0.62
SMAD3-205ENST00000558428 C1orf185Q5T7R7 199 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 TMEM211Q6ICI0 200 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 CBLN3Q6UW01 205 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 DLEU7Q6UYE1 221 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 RPTNQ6XPR3 784 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 B3GNT6Q6ZMB0 384 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 RPRMLQ8N4K4 120 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 DPP10Q8N608 796 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 PHF10Q8WUB8 498 aaKnown RBP11.19□□□□□ -0.62
SMAD3-205ENST00000558428 OIT3Q8WWZ8 545 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 ZG16BQ96DA0 208 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 WDYHV1Q96HA8 205 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 KLHDC3Q9BQ90 382 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 PIGQQ9BRB3 760 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 PRDM14Q9GZV8 571 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 QRSL1Q9H0R6 528 aaKnown RBP11.19□□□□□ -0.62
SMAD3-205ENST00000558428 RUBCNLQ9H714 662 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.19□□□□□ -0.62
SMAD3-205ENST00000558428 MED17Q9NVC6 651 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 ARMCX1Q9P291 453 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 CORO2BQ9UQ03 480 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 L3MBTL1Q9Y468 752 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 FAM215AQ9Y5M1 114 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 CAPN7Q9Y6W3 813 aa11.19□□□□□ -0.62
SMAD3-205ENST00000558428 DOCK7Q96N67 2140 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 A0A087WZY1 265 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 OR2M5A3KFT3 312 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 BBIP1A8MTZ0 92 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 H0Y3Z8 333 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 FBP2O00757 339 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 CCDC22O60826 627 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 HOXD4P09016 255 aaPredicted RBP11.18□□□□□ -0.62
SMAD3-205ENST00000558428 TFPTP0C1Z6 253 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 UBTFL6P0CB48 400 aaPredicted RBP11.18□□□□□ -0.62
SMAD3-205ENST00000558428 BMP2P12643 396 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 POU3F2P20265 443 aaPredicted RBP11.18□□□□□ -0.62
SMAD3-205ENST00000558428 PTGER4P35408 488 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 ADH7P40394 386 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 LHX2P50458 406 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 SUMO3P55854 103 aaPredicted RBP11.18□□□□□ -0.62
SMAD3-205ENST00000558428 NUP107P57740 925 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 GNA13Q14344 377 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 MAPK11Q15759 364 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 PLPPR5Q32ZL2 321 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 MMEL1Q495T6 779 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 RUNDC3AQ59EK9 446 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 RPS26P11Q5JNZ5 115 aaPredicted RBP11.18□□□□□ -0.62
SMAD3-205ENST00000558428 GCNT6Q5T4J0 391 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 AP1ARQ63HQ0 302 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 RTL6Q6ICC9 239 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 EIF3MQ7L2H7 374 aaKnown RBP11.18□□□□□ -0.62
SMAD3-205ENST00000558428 MRGPRGQ86SM5 289 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 SNX32Q86XE0 403 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 MARVELD2Q8N4S9 558 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 ZNF808Q8N4W9 903 aaPredicted RBP11.18□□□□□ -0.62
SMAD3-205ENST00000558428 TOR1AIP2Q8NFQ8 470 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 SLC38A5Q8WUX1 472 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 ITLN2Q8WWU7 325 aaPredicted RBP11.18□□□□□ -0.62
SMAD3-205ENST00000558428 PMM1Q92871 262 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 MAL2Q969L2 176 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 TMEM19Q96HH6 336 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 CGREF1Q99674 301 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 CPPED1Q9BRF8 314 aaPredicted RBP11.18□□□□□ -0.62
SMAD3-205ENST00000558428 LAT2Q9GZY6 243 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 IKZF5Q9H5V7 419 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 MTHFD2LQ9H903 347 aaPredicted RBP11.18□□□□□ -0.62
SMAD3-205ENST00000558428 A4GALTQ9NPC4 353 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 ICAM5Q9UMF0 924 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 SLC35A3Q9Y2D2 325 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 ZNF337Q9Y3M9 751 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 GMEB1Q9Y692 573 aa11.18□□□□□ -0.62
SMAD3-205ENST00000558428 KIAA1549Q9HCM3 1950 aa11.17□□□□□ -0.62
SMAD3-205ENST00000558428 INTS1Q8N201 2190 aaKnown RBP11.17□□□□□ -0.62
SMAD3-205ENST00000558428 LOC100653049A0A140TA62 436 aa11.17□□□□□ -0.62
SMAD3-205ENST00000558428 A1L4Q6 167 aa11.17□□□□□ -0.62
SMAD3-205ENST00000558428 AGAP5A6NIR3 686 aa11.17□□□□□ -0.62
SMAD3-205ENST00000558428 CLDN24A6NM45 220 aa11.17□□□□□ -0.62
SMAD3-205ENST00000558428 C5orf58C9J3I9 102 aa11.17□□□□□ -0.62
SMAD3-205ENST00000558428 H3BML4 177 aa11.17□□□□□ -0.62
SMAD3-205ENST00000558428 LINC01387J3KSC0 135 aa11.17□□□□□ -0.62
SMAD3-205ENST00000558428 SLC22A2O15244 555 aa11.17□□□□□ -0.62
SMAD3-205ENST00000558428 SNX3O60493 162 aa11.17□□□□□ -0.62
SMAD3-205ENST00000558428 KRT34O76011 436 aa11.17□□□□□ -0.62
SMAD3-205ENST00000558428 PEPDP12955 493 aa11.17□□□□□ -0.62
SMAD3-205ENST00000558428 CPN1P15169 458 aa11.17□□□□□ -0.62
SMAD3-205ENST00000558428 IL7RP16871 459 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms