RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 FIG4Q92562 907 aa19.37■□□□□ 0.69
CASC4-204ENST00000557945 BTBD10Q9BSF8 475 aa19.37■□□□□ 0.69
CASC4-204ENST00000557945 ARMC7Q9H6L4 198 aa19.37■□□□□ 0.69
CASC4-204ENST00000557945 ZNF703Q9H7S9 590 aaPredicted RBP19.37■□□□□ 0.69
CASC4-204ENST00000557945 PTGES2Q9H7Z7 377 aa19.37■□□□□ 0.69
CASC4-204ENST00000557945 AGPAT4Q9NRZ5 378 aa19.37■□□□□ 0.69
CASC4-204ENST00000557945 OLAHQ9NV23 265 aa19.37■□□□□ 0.69
CASC4-204ENST00000557945 EGFL7Q9UHF1 273 aa19.37■□□□□ 0.69
CASC4-204ENST00000557945 PRPF19Q9UMS4 504 aaKnown RBP19.37■□□□□ 0.69
CASC4-204ENST00000557945 NPIPA1Q9UND3 350 aa19.37■□□□□ 0.69
CASC4-204ENST00000557945 IGLV3-32A0A0A0MS00 114 aa19.36■□□□□ 0.69
CASC4-204ENST00000557945 CXCR6O00574 342 aa19.36■□□□□ 0.69
CASC4-204ENST00000557945 EIF4E2O60573 245 aaKnown RBP19.36■□□□□ 0.69
CASC4-204ENST00000557945 BCAS1O75363 584 aaPredicted RBP19.36■□□□□ 0.69
CASC4-204ENST00000557945 TRAPPC6AO75865 159 aa19.36■□□□□ 0.69
CASC4-204ENST00000557945 HSD17B1P14061 328 aa19.36■□□□□ 0.69
CASC4-204ENST00000557945 MSX1P28360 303 aa19.36■□□□□ 0.69
CASC4-204ENST00000557945 PGM1P36871 562 aa19.36■□□□□ 0.69
CASC4-204ENST00000557945 RASSF2P50749 326 aa19.36■□□□□ 0.69
CASC4-204ENST00000557945 CCR4P51679 360 aa19.36■□□□□ 0.69
CASC4-204ENST00000557945 CEACAM7Q14002 265 aa19.36■□□□□ 0.69
CASC4-204ENST00000557945 LRRC23Q53EV4 343 aaPredicted RBP19.36■□□□□ 0.69
CASC4-204ENST00000557945 CBLN3Q6UW01 205 aa19.36■□□□□ 0.69
CASC4-204ENST00000557945 CCDC80Q76M96 950 aa19.36■□□□□ 0.69
CASC4-204ENST00000557945 FAM109AQ8N4B1 249 aa19.36■□□□□ 0.69
CASC4-204ENST00000557945 FADS6Q8N9I5 356 aa19.36■□□□□ 0.69
CASC4-204ENST00000557945 SMYD1Q8NB12 490 aa19.36■□□□□ 0.69
CASC4-204ENST00000557945 CNOT9Q92600 299 aaKnown RBP19.36■□□□□ 0.69
CASC4-204ENST00000557945 THTPAQ9BU02 230 aa19.36■□□□□ 0.69
CASC4-204ENST00000557945 LAT2Q9GZY6 243 aa19.36■□□□□ 0.69
CASC4-204ENST00000557945 DEFB127Q9H1M4 99 aa19.36■□□□□ 0.69
CASC4-204ENST00000557945 ASF1BQ9NVP2 202 aa19.36■□□□□ 0.69
CASC4-204ENST00000557945 RLIMQ9NVW2 624 aa19.36■□□□□ 0.69
CASC4-204ENST00000557945 CD300AQ9UGN4 299 aa19.36■□□□□ 0.69
CASC4-204ENST00000557945 DKKL1Q9UK85 242 aa19.36■□□□□ 0.69
CASC4-204ENST00000557945 BSNQ9UPA5 3926 aa19.36■□□□□ 0.69
CASC4-204ENST00000557945 B4DXG7 233 aa19.35■□□□□ 0.69
CASC4-204ENST00000557945 GMNNO75496 209 aa19.35■□□□□ 0.69
CASC4-204ENST00000557945 MFN2O95140 757 aa19.35■□□□□ 0.69
CASC4-204ENST00000557945 NUDT14O95848 222 aa19.35■□□□□ 0.69
CASC4-204ENST00000557945 NCK1P16333 377 aa19.35■□□□□ 0.69
CASC4-204ENST00000557945 HTR1EP28566 365 aa19.35■□□□□ 0.69
CASC4-204ENST00000557945 PRKAR1BP31321 381 aa19.35■□□□□ 0.69
CASC4-204ENST00000557945 KDELR2P33947 212 aa19.35■□□□□ 0.69
CASC4-204ENST00000557945 MSX2P35548 267 aaPredicted RBP19.35■□□□□ 0.69
CASC4-204ENST00000557945 EEF1A1P68104 462 aaKnown RBP19.35■□□□□ 0.69
CASC4-204ENST00000557945 GABPB1Q06547 395 aaPredicted RBP19.35■□□□□ 0.69
CASC4-204ENST00000557945 RNF220Q5VTB9 566 aa19.35■□□□□ 0.69
CASC4-204ENST00000557945 ARHGAP24Q8N264 748 aa19.35■□□□□ 0.69
CASC4-204ENST00000557945 CLIP4Q8N3C7 705 aa19.35■□□□□ 0.69
CASC4-204ENST00000557945 CPT1CQ8TCG5 803 aa19.35■□□□□ 0.69
CASC4-204ENST00000557945 FAR1Q8WVX9 515 aa19.35■□□□□ 0.69
CASC4-204ENST00000557945 NR4A3Q92570 626 aa19.35■□□□□ 0.69
CASC4-204ENST00000557945 DTNBP1Q96EV8 351 aa19.35■□□□□ 0.69
CASC4-204ENST00000557945 SLC13A4Q9UKG4 626 aa19.35■□□□□ 0.69
CASC4-204ENST00000557945 SUV39H1O43463 412 aa19.34■□□□□ 0.69
CASC4-204ENST00000557945 CDC40O60508 579 aaKnown RBP eCLIP19.34■□□□□ 0.69
CASC4-204ENST00000557945 PDE5AO76074 875 aa19.34■□□□□ 0.69
CASC4-204ENST00000557945 IFNA14P01570 189 aa19.34■□□□□ 0.69
CASC4-204ENST00000557945 CELA3AP09093 270 aa19.34■□□□□ 0.69
CASC4-204ENST00000557945 TCEA1P23193 301 aaKnown RBP19.34■□□□□ 0.69
CASC4-204ENST00000557945 MST1P26927 711 aa19.34■□□□□ 0.69
CASC4-204ENST00000557945 DPP4P27487 766 aa19.34■□□□□ 0.69
CASC4-204ENST00000557945 P2RX1P51575 399 aa19.34■□□□□ 0.69
CASC4-204ENST00000557945 DMTNQ08495 405 aa19.34■□□□□ 0.69
CASC4-204ENST00000557945 SKP2Q13309 424 aa19.34■□□□□ 0.69
CASC4-204ENST00000557945 SLC10A1Q14973 349 aa19.34■□□□□ 0.69
CASC4-204ENST00000557945 ZSWIM7Q19AV6 140 aa19.34■□□□□ 0.69
CASC4-204ENST00000557945 SPATS1Q496A3 300 aa19.34■□□□□ 0.69
CASC4-204ENST00000557945 EIPR1Q53HC9 387 aa19.34■□□□□ 0.69
CASC4-204ENST00000557945 DHRS4L2Q6PKH6 230 aa19.34■□□□□ 0.69
CASC4-204ENST00000557945 TOR1AIP2Q8NFQ8 470 aa19.34■□□□□ 0.69
CASC4-204ENST00000557945 TAMM41Q96BW9 452 aa19.34■□□□□ 0.69
CASC4-204ENST00000557945 UBQLN3Q9H347 655 aa19.34■□□□□ 0.69
CASC4-204ENST00000557945 FAM208BQ5VWN6 2430 aa19.34■□□□□ 0.69
CASC4-204ENST00000557945 COL6A6A6NMZ7 2263 aa19.34■□□□□ 0.69
CASC4-204ENST00000557945 CDHR4A6H8M9 788 aa19.33■□□□□ 0.69
CASC4-204ENST00000557945 FAM47E-STBD1D6RA91 191 aa19.33■□□□□ 0.69
CASC4-204ENST00000557945 TPST1O60507 370 aa19.33■□□□□ 0.69
CASC4-204ENST00000557945 GGT1P19440 569 aa19.33■□□□□ 0.69
CASC4-204ENST00000557945 SRD5A2P31213 254 aa19.33■□□□□ 0.69
CASC4-204ENST00000557945 DSCR4P56555 118 aaPredicted RBP19.33■□□□□ 0.69
CASC4-204ENST00000557945 GLYATQ6IB77 296 aa19.33■□□□□ 0.69
CASC4-204ENST00000557945 PRICKLE2Q7Z3G6 844 aa19.33■□□□□ 0.69
CASC4-204ENST00000557945 SIAH3Q8IW03 269 aa19.33■□□□□ 0.69
CASC4-204ENST00000557945 ZNF843Q8N446 348 aa19.33■□□□□ 0.69
CASC4-204ENST00000557945 FAM71CQ8NEG0 241 aa19.33■□□□□ 0.69
CASC4-204ENST00000557945 BHLHE22Q8NFJ8 381 aaPredicted RBP19.33■□□□□ 0.69
CASC4-204ENST00000557945 OR14L1PQ8NHC6 308 aa19.33■□□□□ 0.69
CASC4-204ENST00000557945 FAM162AQ96A26 154 aa19.33■□□□□ 0.69
CASC4-204ENST00000557945 ARSGQ96EG1 525 aa19.33■□□□□ 0.69
CASC4-204ENST00000557945 C1GALT1C1Q96EU7 318 aa19.33■□□□□ 0.69
CASC4-204ENST00000557945 CLPTM1LQ96KA5 538 aa19.33■□□□□ 0.69
CASC4-204ENST00000557945 PINK1Q9BXM7 581 aa19.33■□□□□ 0.69
CASC4-204ENST00000557945 EXO5Q9H790 373 aa19.33■□□□□ 0.69
CASC4-204ENST00000557945 ZDHHC11Q9H8X9 412 aa19.33■□□□□ 0.69
CASC4-204ENST00000557945 QPCTLQ9NXS2 382 aa19.33■□□□□ 0.69
CASC4-204ENST00000557945 DNAJB12Q9NXW2 375 aaKnown RBP19.33■□□□□ 0.69
CASC4-204ENST00000557945 ICAM5Q9UMF0 924 aa19.33■□□□□ 0.69
CASC4-204ENST00000557945 ANKUB1A6NFN9 424 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms