RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 FAM219BQ5XKK7 198 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 OR4F3Q6IEY1 312 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 UQCC3Q6UW78 93 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 GDPGP1Q6ZNW5 385 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 CENPQQ7L2Z9 268 aaPredicted RBP2.6□□□□□ -1.99
TRAV28-201ENST00000557548 CDR2LQ86X02 465 aaPredicted RBP2.6□□□□□ -1.99
TRAV28-201ENST00000557548 ECHDC2Q86YB7 292 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 PSTKQ8IV42 348 aaKnown RBP2.6□□□□□ -1.99
TRAV28-201ENST00000557548 PHC2Q8IXK0 858 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 METTL4Q8N3J2 472 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 Q8N9G6 341 aaPredicted RBP2.6□□□□□ -1.99
TRAV28-201ENST00000557548 MFSD9Q8NBP5 474 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 PRSS33Q8NF86 280 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 OR1L4Q8NGR5 311 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 OR1B1Q8NGR6 318 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 SLC2A14Q8TDB8 520 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 SSC4DQ8WTU2 575 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 SCFD1Q8WVM8 642 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 C19orf60Q96EN9 201 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 C8orf76Q96K31 380 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 ATP6V1G3Q96LB4 118 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 SYT15Q9BQS2 421 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 RIOK1Q9BRS2 568 aaKnown RBP2.6□□□□□ -1.99
TRAV28-201ENST00000557548 SIKE1Q9BRV8 207 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 CHRDL1Q9BU40 450 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 NUP58Q9BVL2 599 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 SP140LQ9H930 580 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 ZNF446Q9NWS9 450 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 NDE1Q9NXR1 346 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 IL36GQ9NZH8 169 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 SPATA7Q9P0W8 599 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 CACNG5Q9UF02 275 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 CIDEBQ9UHD4 219 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 V9GYY5 206 aaPredicted RBP2.6□□□□□ -1.99
TRAV28-201ENST00000557548 MAP3K19Q56UN5 1328 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 SALL1Q9NSC2 1324 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 METP08581 1390 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 KANK1Q14678 1352 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 A0A075B6Q4 140 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 A0A087X002 238 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 TRBV7-9A0A0J9YWB2 115 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 TEX48A0A1B0GUV7 120 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 SERTM2A0A1B0GWG4 89 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 OR6C65A6NJZ3 312 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 MPTX1A8MV57 137 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 NPIPA7E9PJI5 369 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 PDHXO00330 501 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 TRAFD1O14545 582 aaPredicted RBP2.59□□□□□ -1.99
TRAV28-201ENST00000557548 TFECO14948 347 aaPredicted RBP2.59□□□□□ -1.99
TRAV28-201ENST00000557548 MSH4O15457 936 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 TYROBPO43914 113 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 WBP4O75554 376 aaKnown RBP2.59□□□□□ -1.99
TRAV28-201ENST00000557548 TSPAN12O95859 305 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 IGHG1P01857 330 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 ALPIP09923 528 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 ZSCAN5DPP0CG00 497 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 HSMCR30P0CW71 290 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 NPIPA8P0DM63 369 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 BCKDHAP12694 445 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 ANXA8P13928 327 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 SDC1P18827 310 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 ZNF10P21506 573 aaPredicted RBP2.59□□□□□ -1.99
TRAV28-201ENST00000557548 PPP2R1BP30154 601 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 BMI1P35226 326 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 SLC1A4P43007 532 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 GNPDA1P46926 289 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 TPMTP51580 245 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 ATP1B3P54709 279 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 NDUFV3P56181 108 aaKnown RBP2.59□□□□□ -1.99
TRAV28-201ENST00000557548 OTUD4Q01804 1114 aaKnown RBP2.59□□□□□ -1.99
TRAV28-201ENST00000557548 ARHGAP19Q14CB8 494 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 ZNF146Q15072 292 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 SNAI3Q3KNW1 292 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 TP53I3Q53FA7 332 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 SFT2D3Q587I9 215 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 ANXA8L1Q5VT79 327 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 OR2A2Q6IF42 318 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 CLEC2AQ6UVW9 174 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 APTXQ7Z2E3 356 aaKnown RBP2.59□□□□□ -1.99
TRAV28-201ENST00000557548 CEACAM19Q7Z692 300 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 MTERF4Q7Z6M4 381 aaKnown RBP2.59□□□□□ -1.99
TRAV28-201ENST00000557548 DHDDSQ86SQ9 333 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 SERINC5Q86VE9 423 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 ZFAND4Q86XD8 727 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 BPIFB2Q8N4F0 458 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 LINC00469Q8N7U9 141 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 C17orf47Q8NEP4 570 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 OR51G2Q8NGK0 314 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 OR2T6Q8NHC8 308 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 RFESDQ8TAC1 157 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 PEX13Q92968 403 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 LRRC39Q96DD0 335 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 SLC38A2Q96QD8 506 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 MTMR9Q96QG7 549 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 LGMNQ99538 433 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 COPS8Q99627 209 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 CITED1Q99966 193 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 HSD17B14Q9BPX1 270 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 MTG1Q9BT17 334 aaPredicted RBP2.59□□□□□ -1.99
TRAV28-201ENST00000557548 IQCGQ9H095 443 aaKnown RBP2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms