RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 ALDH3A2P51648 485 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 ZNF75DP51815 510 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 TPI1P60174 286 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 AP1S1P61966 158 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 CDR2Q01850 454 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 FASTKQ14296 549 aaKnown RBP3.3□□□□□ -1.88
CHD8-212ENST00000557329 INAQ16352 499 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 CAMK4Q16566 473 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 CTU2Q2VPK5 515 aaKnown RBP3.3□□□□□ -1.88
CHD8-212ENST00000557329 CCDC14Q49A88 953 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 PTPN20Q4JDL3 420 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 MFSD4BQ5TF39 518 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 TXNRD3NBQ6F5E7 133 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 SPINK14Q6IE38 97 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 CNSTQ6PJW8 725 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 CORO6Q6QEF8 472 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 IGFL2Q6UWQ7 119 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 PAMR1Q6UXH9 720 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 DET1Q7L5Y6 550 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 NOTCH2NLQ7Z3S9 236 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 SZRD1Q7Z422 152 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 ZNF485Q8NCK3 441 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 TMEM35BQ8NCS4 154 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 MSANTD4Q8NCY6 345 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 LPCAT1Q8NF37 534 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 OR11G2Q8NGC1 345 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 OR5M9Q8NGP3 310 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 FAM172AQ8WUF8 416 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 PTPMT1Q8WUK0 201 aaPredicted RBP3.3□□□□□ -1.88
CHD8-212ENST00000557329 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.3□□□□□ -1.88
CHD8-212ENST00000557329 LCN9Q8WX39 176 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 RXFP2Q8WXD0 754 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 DYRK2Q92630 601 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 HAS2Q92819 552 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 SLAMF9Q96A28 289 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 COX14Q96I36 57 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 ZNF396Q96N95 335 aaPredicted RBP3.3□□□□□ -1.88
CHD8-212ENST00000557329 MS4A10Q96PG2 267 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 KRT12Q99456 494 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 CRACR2AQ9BSW2 395 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 HES7Q9BYE0 225 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 RAB33BQ9H082 229 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 WWP1Q9H0M0 922 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 WNT5BQ9H1J7 359 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 P2RY12Q9H244 342 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 CARD9Q9H257 536 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 LRTM1Q9HBL6 345 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 NT5MQ9NPB1 228 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 PTTG2Q9NZH5 202 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 PKD2L2Q9NZM6 624 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 VPS18Q9P253 973 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 TEKT2Q9UIF3 430 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 CHKBQ9Y259 395 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 WBP11Q9Y2W2 641 aaKnown RBP3.3□□□□□ -1.88
CHD8-212ENST00000557329 AP1M2Q9Y6Q5 423 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 COLEC10Q9Y6Z7 277 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 A0A1B0GVL5 298 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 A0A1W2PQ09 198 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 OR2AG2A6NM03 316 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 NPIPA2E9PIF3 369 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 NPIPA3F8WFD2 350 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 EEF2KO00418 725 aaKnown RBP3.29□□□□□ -1.88
CHD8-212ENST00000557329 PES1O00541 588 aaKnown RBP3.29□□□□□ -1.88
CHD8-212ENST00000557329 TRAFD1O14545 582 aaPredicted RBP3.29□□□□□ -1.88
CHD8-212ENST00000557329 GAPDHSO14556 408 aaPredicted RBP3.29□□□□□ -1.88
CHD8-212ENST00000557329 RASGRF2O14827 1237 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 VEGFDO43915 354 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 DOK2O60496 412 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 DFFBO76075 338 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 PGLSO95336 258 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 HEXBP07686 556 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 OR2T7P0C7T2 308 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 PNMA6AP0CW24 399 aaPredicted RBP3.29□□□□□ -1.88
CHD8-212ENST00000557329 ZNF24P17028 368 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 DESP17661 470 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 PRDX3P30048 256 aaKnown RBP3.29□□□□□ -1.88
CHD8-212ENST00000557329 GCH1P30793 250 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 CSNK1DP48730 415 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 NUP107P57740 925 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 FKBP3Q00688 224 aaKnown RBP3.29□□□□□ -1.88
CHD8-212ENST00000557329 DMTNQ08495 405 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 SLC10A7Q0GE19 358 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 PRKG2Q13237 762 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 CHRFAM7AQ494W8 412 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 ANKRD20A8PQ5CZ79 823 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 WLSQ5T9L3 541 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 KLHL10Q6JEL2 608 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 ABRAXAS1Q6UWZ7 409 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 CDHR3Q6ZTQ4 885 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 NDUFAF7Q7L592 441 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 GALNTL5Q7Z4T8 443 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 AMZ2Q86W34 360 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 C17orf53Q8N3J3 647 aaPredicted RBP3.29□□□□□ -1.88
CHD8-212ENST00000557329 RPRMLQ8N4K4 120 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 DNAJC22Q8N4W6 341 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 LINC00301Q8NCQ3 95 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 ZNF397Q8NF99 534 aaPredicted RBP3.29□□□□□ -1.88
CHD8-212ENST00000557329 LINC01560Q8TB33 94 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 PHF10Q8WUB8 498 aaKnown RBP3.29□□□□□ -1.88
CHD8-212ENST00000557329 ECHDC3Q96DC8 303 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms