RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ENPP1P22413 925 aa8.37□□□□□ -1.07
SYNE3-205ENST00000557275 POU3F4P49335 361 aa8.37□□□□□ -1.07
SYNE3-205ENST00000557275 UBE2G1P62253 170 aa8.37□□□□□ -1.07
SYNE3-205ENST00000557275 P2RY14Q15391 338 aa8.37□□□□□ -1.07
SYNE3-205ENST00000557275 WDR88Q6ZMY6 472 aa8.37□□□□□ -1.07
SYNE3-205ENST00000557275 SLC51BQ86UW2 128 aa8.37□□□□□ -1.07
SYNE3-205ENST00000557275 KLBQ86Z14 1044 aa8.37□□□□□ -1.07
SYNE3-205ENST00000557275 PGBD5Q8N414 524 aa8.37□□□□□ -1.07
SYNE3-205ENST00000557275 DCBLD1Q8N8Z6 715 aa8.37□□□□□ -1.07
SYNE3-205ENST00000557275 OR7D2Q96RA2 312 aa8.37□□□□□ -1.07
SYNE3-205ENST00000557275 TTYH3Q9C0H2 523 aa8.37□□□□□ -1.07
SYNE3-205ENST00000557275 CARS2Q9HA77 564 aaKnown RBP8.37□□□□□ -1.07
SYNE3-205ENST00000557275 RDH14Q9HBH5 336 aa8.37□□□□□ -1.07
SYNE3-205ENST00000557275 ELK4P28324 431 aa8.37□□□□□ -1.07
SYNE3-205ENST00000557275 GPR19Q15760 415 aa8.37□□□□□ -1.07
SYNE3-205ENST00000557275 OR4F3Q6IEY1 312 aa8.37□□□□□ -1.07
SYNE3-205ENST00000557275 ANKRD53Q8N9V6 530 aa8.37□□□□□ -1.07
SYNE3-205ENST00000557275 LNX1Q8TBB1 728 aaPredicted RBP8.37□□□□□ -1.07
SYNE3-205ENST00000557275 PSMF1Q92530 271 aa8.37□□□□□ -1.07
SYNE3-205ENST00000557275 GALNT9Q9HCQ5 603 aa8.37□□□□□ -1.07
SYNE3-205ENST00000557275 CTPS2Q9NRF8 586 aa8.37□□□□□ -1.07
SYNE3-205ENST00000557275 UPK3BL1B0FP48 263 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 UPK3BL2E5RIL1 263 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 F2RP25116 425 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 STC1P52823 247 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 TMEM198Q66K66 360 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 FBXL20Q96IG2 436 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 ALG8Q9BVK2 526 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 C8orf33Q9H7E9 229 aaPredicted RBP8.36□□□□□ -1.07
SYNE3-205ENST00000557275 LALBAP00709 142 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 ADRB2P07550 413 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 OR14L1PQ8NHC6 308 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 MED18Q9BUE0 208 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 SCN1AP35498 2009 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 A0A1B0GV50 99 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 SMIM17P0DL12 118 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 TAS2R45P59539 299 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 MANEALQ5VSG8 457 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 GPR155Q7Z3F1 870 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 OR6V1Q8N148 313 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 TMEM104Q8NE00 496 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 ANKRD60Q9BZ19 345 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 FZD10Q9ULW2 581 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 H3BMQ9 156 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 AREGP15514 252 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 ZNF91Q05481 1191 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 ELOCQ15369 112 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 STK11Q15831 433 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 OR5W2Q8NH69 310 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 TOMM40LQ969M1 308 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 C11orf84Q9BUA3 381 aaPredicted RBP8.36□□□□□ -1.07
SYNE3-205ENST00000557275 ARHGAP39Q9C0H5 1083 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 TM7SF3Q9NS93 570 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 SLC35A3Q9Y2D2 325 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 CKAP5Q14008 2032 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 C2CD4BA6NLJ0 364 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 UGDHO60701 494 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 CDK5Q00535 292 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 HSF1Q00613 529 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 PLCXD2Q0VAA5 305 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 LAPTM4AQ15012 233 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 LCTLQ6UWM7 567 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 HBEGFQ99075 208 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 LHX6Q9UPM6 363 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 PCDHA9Q9Y5H5 950 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 FAM159BA6NKW6 160 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 SPATA31C2B4DYI2 1134 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 DHRS4L1P0CG22 281 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 ARL2P36404 184 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 OR52H1Q8NGJ2 320 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 MOCOSQ96EN8 888 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 ANKUB1A6NFN9 424 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 C4orf47A7E2U8 309 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 SLC16A6O15403 523 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 P04436 131 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 JAM2P57087 298 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 SLC14A1Q13336 389 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 OR6K2Q8NGY2 324 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 ECHDC3Q96DC8 303 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 TRAV18A0A075B6X5 111 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 NRP1O14786 923 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 EPHA1P21709 976 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 RFC2P35250 354 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 HOXA1P49639 335 aaPredicted RBP8.36□□□□□ -1.07
SYNE3-205ENST00000557275 SORDQ00796 357 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 SERTAD2Q14140 314 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 RNF111Q6ZNA4 994 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 LRRC56Q8IYG6 542 aaPredicted RBP8.36□□□□□ -1.07
SYNE3-205ENST00000557275 SLC38A6Q8IZM9 456 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 MRIQ9BWK5 157 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 C1orf198Q9H425 327 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 SAP18O00422 153 aaKnown RBP8.36□□□□□ -1.07
SYNE3-205ENST00000557275 FBP1P09467 338 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 KLF1Q13351 362 aaPredicted RBP8.36□□□□□ -1.07
SYNE3-205ENST00000557275 VARS2Q5ST30 1063 aaKnown RBP8.36□□□□□ -1.07
SYNE3-205ENST00000557275 AGTRAPQ6RW13 159 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 RETREG3Q86VR2 466 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 SOX7Q9BT81 388 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 TAC3Q9UHF0 121 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 PURGQ9UJV8 347 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms