RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 ANKRA2Q9H9E1 313 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 MCTS1Q9ULC4 181 aaKnown RBP7.75□□□□□ -1.17
VRK1-206ENST00000557222 CHD3Q12873 2000 aaKnown RBP7.74□□□□□ -1.17
VRK1-206ENST00000557222 CADP27708 2225 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 TRIM49D1C9J1S8 452 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 ALG1L2C9J202 215 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 H0YC42 278 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 H3BML4 177 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 OVOL3O00110 214 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 SEC14L5O43304 696 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 AQP8O94778 261 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 KCNH1O95259 989 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 UTS2O95399 124 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 SYNGR4O95473 234 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 ANGPTL1O95841 491 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 PLGP00747 810 aaPredicted RBP7.74□□□□□ -1.17
VRK1-206ENST00000557222 PABPC4LP0CB38 370 aaKnown RBP7.74□□□□□ -1.17
VRK1-206ENST00000557222 CHN1P15882 459 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 TSPAN8P19075 237 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 TCEA1P23193 301 aaKnown RBP7.74□□□□□ -1.17
VRK1-206ENST00000557222 NTSP30990 170 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 IDUAP35475 653 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 MAP3K8P41279 467 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 NCBP2P52298 156 aaKnown RBP eCLIP7.74□□□□□ -1.17
VRK1-206ENST00000557222 PRKAA2P54646 552 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 TPD52P55327 224 aaPredicted RBP7.74□□□□□ -1.17
VRK1-206ENST00000557222 ATP5J2P56134 94 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 RPS4XP62701 263 aaKnown RBP7.74□□□□□ -1.17
VRK1-206ENST00000557222 CKAP4Q07065 602 aaKnown RBP7.74□□□□□ -1.17
VRK1-206ENST00000557222 C2orf80Q0P641 193 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 LCP2Q13094 533 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 CAPRIN1Q14444 709 aaKnown RBP7.74□□□□□ -1.17
VRK1-206ENST00000557222 VPS26BQ4G0F5 336 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 PDSS1Q5T2R2 415 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 CPTPQ5TA50 214 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 FAM71E1Q6IPT2 247 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 C8orf74Q6P047 294 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 ESPNLQ6ZVH7 1005 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 IKBIPQ70UQ0 350 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 RPS27LQ71UM5 84 aaKnown RBP7.74□□□□□ -1.17
VRK1-206ENST00000557222 SSX8Q7RTT4 187 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 MARCH3Q86UD3 253 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 GGNQ86UU5 652 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 MISPQ8IVT2 679 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 HOMEZQ8IX15 550 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 CEP70Q8NHQ1 597 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 DCAKDQ8WVC6 231 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 FAM168AQ92567 244 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 ELP4Q96EB1 424 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 L3HYPDHQ96EM0 354 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 TRMT61AQ96FX7 289 aaKnown RBP7.74□□□□□ -1.17
VRK1-206ENST00000557222 APIPQ96GX9 242 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 ZNF764Q96H86 408 aaPredicted RBP7.74□□□□□ -1.17
VRK1-206ENST00000557222 ADGRG7Q96K78 797 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 AMDHD1Q96NU7 426 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 HBEGFQ99075 208 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 RTN4RQ9BZR6 473 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 GP6Q9HCN6 339 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 MYNNQ9NPC7 610 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 NGBQ9NPG2 151 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 MIEF1Q9NQG6 463 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 DDX18Q9NVP1 670 aaKnown RBP7.74□□□□□ -1.17
VRK1-206ENST00000557222 NTMQ9P121 344 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 ANK2Q01484 3957 aa7.74□□□□□ -1.17
VRK1-206ENST00000557222 A0A087WUV0 522 aaPredicted RBP7.73□□□□□ -1.17
VRK1-206ENST00000557222 UQCRHLA0A096LP55 91 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 ESYT3A0FGR9 886 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 TLX2O43763 284 aaPredicted RBP7.73□□□□□ -1.17
VRK1-206ENST00000557222 DLX3O60479 287 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 NME6O75414 186 aaPredicted RBP7.73□□□□□ -1.17
VRK1-206ENST00000557222 HSPA4LO95757 839 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 JUNP05412 331 aaKnown RBP7.73□□□□□ -1.17
VRK1-206ENST00000557222 FESP07332 822 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 TUBBP07437 444 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 GSTA1P08263 222 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 EIF1P41567 113 aaKnown RBP7.73□□□□□ -1.17
VRK1-206ENST00000557222 SLC6A8P48029 635 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 SLC7A5Q01650 507 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 STX5Q13190 355 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 TNK1Q13470 666 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 EXOC3L2Q2M3D2 409 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 CTU2Q2VPK5 515 aaKnown RBP7.73□□□□□ -1.17
VRK1-206ENST00000557222 TCHHL1Q5QJ38 904 aaPredicted RBP7.73□□□□□ -1.17
VRK1-206ENST00000557222 SH2D4BQ5SQS7 431 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 TMEM107Q6UX40 140 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 TRABD2AQ86V40 505 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 MMGT1Q8N4V1 131 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 OR5M1Q8NGP8 315 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 OR10D3Q8NH80 312 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 OR2V1Q8NHB1 315 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 FAM110BQ8TC76 370 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 ACMSDQ8TDX5 336 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 HSD17B8Q92506 261 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 ANP32BQ92688 251 aaKnown RBP7.73□□□□□ -1.17
VRK1-206ENST00000557222 CCDC126Q96EE4 140 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 TMEM237Q96Q45 408 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 ACTR6Q9GZN1 396 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 CDC42EP4Q9H3Q1 356 aaKnown RBP7.73□□□□□ -1.17
VRK1-206ENST00000557222 GLIPR2Q9H4G4 154 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 LRTM1Q9HBL6 345 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms