RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 TIGD3Q6B0B8 471 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 HBMQ6B0K9 141 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 TANGO2Q6ICL3 276 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 TBC1D3CQ6IPX1 549 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 SDE2Q6IQ49 451 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 NIPAL3Q6P499 406 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 SMARCD3Q6STE5 483 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 ABHD13Q7L211 337 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 GPALPP1Q8IXQ4 340 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 TBC1D3Q8IZP1 549 aaPredicted RBP6.51□□□□□ -1.37
TDP1-213ENST00000555880 TCTE3Q8IZS6 198 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 ZNF619Q8N2I2 560 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 COX18Q8N8Q8 333 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 DUSP18Q8NEJ0 188 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 OR10H4Q8NGA5 316 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 ZCCHC10Q8TBK6 192 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 JPH3Q8WXH2 748 aaPredicted RBP6.51□□□□□ -1.37
TDP1-213ENST00000555880 HS6ST2Q96MM7 605 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 SOSTQ9BQB4 213 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 NDC1Q9BTX1 674 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 IFT27Q9BW83 186 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 BEX2Q9BXY8 128 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 OR52D1Q9H346 318 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 B3GAT2Q9NPZ5 323 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 HINT3Q9NQE9 182 aaKnown RBP6.51□□□□□ -1.37
TDP1-213ENST00000555880 RPRD1BQ9NQG5 326 aaKnown RBP6.51□□□□□ -1.37
TDP1-213ENST00000555880 C14orf105Q9NVL8 296 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 SIDT1Q9NXL6 827 aaKnown RBP6.51□□□□□ -1.37
TDP1-213ENST00000555880 EXTL2Q9UBQ6 330 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 MSRAQ9UJ68 235 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 FBXL21Q9UKT6 434 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 CHST2Q9Y4C5 530 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 ALG5Q9Y673 324 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 PRSS38A1L453 326 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 CDC42EP2O14613 210 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 SCAMP1O15126 338 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 PLRG1O43660 514 aaKnown RBP6.5□□□□□ -1.37
TDP1-213ENST00000555880 SCO2O43819 266 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 FMO6PO60774 539 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 SLC43A1O75387 559 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 AK1P00568 194 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 THY1P04216 161 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 SAGP10523 405 aaPredicted RBP6.5□□□□□ -1.37
TDP1-213ENST00000555880 NID1P14543 1247 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 CD53P19397 219 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 ALAS2P22557 587 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 FCARP24071 287 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 RBMS1P29558 406 aaKnown RBP6.5□□□□□ -1.37
TDP1-213ENST00000555880 MAT2AP31153 395 aaKnown RBP6.5□□□□□ -1.37
TDP1-213ENST00000555880 BMP8BP34820 402 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 ATP12AP54707 1039 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 ACTC1P68032 377 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 ACTA1P68133 377 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 INSM1Q01101 510 aaPredicted RBP6.5□□□□□ -1.37
TDP1-213ENST00000555880 ENPP2Q13822 863 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 GALEQ14376 348 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 KIR2DS3Q14952 304 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 P2RY14Q15391 338 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 CCDC85BQ15834 202 aaPredicted RBP6.5□□□□□ -1.37
TDP1-213ENST00000555880 DEFB134Q4QY38 66 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 KLHL12Q53G59 568 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 EOGTQ5NDL2 527 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 DCST2Q5T1A1 773 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 ZNF438Q7Z4V0 828 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 VN1R4Q7Z5H5 301 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 BMP8AQ7Z5Y6 402 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 SPRED2Q7Z698 418 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 TPRA1Q86W33 373 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 LRRC28Q86X40 367 aaPredicted RBP6.5□□□□□ -1.37
TDP1-213ENST00000555880 LNX2Q8N448 690 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 ZNF655Q8N720 491 aaPredicted RBP6.5□□□□□ -1.37
TDP1-213ENST00000555880 CAMKVQ8NCB2 501 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 OR5W2Q8NH69 310 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 OR4C6Q8NH72 309 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 TMEM239Q8WW34 195 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 RERGQ96A58 199 aaPredicted RBP6.5□□□□□ -1.37
TDP1-213ENST00000555880 CREB3L1Q96BA8 519 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 RNF170Q96K19 258 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 ART5Q96L15 291 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 C10orf90Q96M02 699 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 FYTTD1Q96QD9 318 aaKnown RBP6.5□□□□□ -1.37
TDP1-213ENST00000555880 SDF2Q99470 211 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 GON7Q9BXV9 100 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 DPH1Q9BZG8 443 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 ZNF350Q9GZX5 532 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 RNF32Q9H0A6 362 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 LMAN2LQ9H0V9 348 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 PIGUQ9H490 435 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 C6orf106Q9H6K1 298 aaPredicted RBP6.5□□□□□ -1.37
TDP1-213ENST00000555880 CERS4Q9HA82 394 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 FGF22Q9HCT0 170 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 POLMQ9NP87 494 aaPredicted RBP6.5□□□□□ -1.37
TDP1-213ENST00000555880 ADAP2Q9NPF8 381 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 NLKQ9UBE8 527 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 C19orf53Q9UNZ5 99 aaPredicted RBP6.5□□□□□ -1.37
TDP1-213ENST00000555880 SATB2Q9UPW6 733 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 MED31Q9Y3C7 131 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 CLCA3PQ9Y6N3 262 aa6.5□□□□□ -1.37
TDP1-213ENST00000555880 A0A0B4J293 547 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 LRRC72A6NJI9 287 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms