RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 PKN2Q16513 984 aaKnown RBP1.19□□□□□ -2.22
SRP54-207ENST00000555535 TYSND1Q2T9J0 566 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 IFI44LQ53G44 452 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 RABGAP1LQ5R372 815 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 LIPKQ5VXJ0 399 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 PVRIGQ6DKI7 326 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 WDR74Q6RFH5 385 aaPredicted RBP1.19□□□□□ -2.22
SRP54-207ENST00000555535 ZNF562Q6V9R5 426 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 Q6ZR03 302 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 YRDCQ86U90 279 aaKnown RBP1.19□□□□□ -2.22
SRP54-207ENST00000555535 IFNEQ86WN2 208 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 TRUB1Q8WWH5 349 aaKnown RBP1.19□□□□□ -2.22
SRP54-207ENST00000555535 FRZBQ92765 325 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 UCN3Q969E3 161 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 ADIPOR1Q96A54 375 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 HDHD3Q9BSH5 251 aaPredicted RBP1.19□□□□□ -2.22
SRP54-207ENST00000555535 EML4Q9HC35 981 aaKnown RBP1.19□□□□□ -2.22
SRP54-207ENST00000555535 RBM28Q9NW13 759 aaKnown RBP1.19□□□□□ -2.22
SRP54-207ENST00000555535 AKAP7Q9P0M2 348 aaPredicted RBP1.19□□□□□ -2.22
SRP54-207ENST00000555535 GHRLQ9UBU3 117 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 MAD2L2Q9UI95 211 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 LIPT1Q9Y234 373 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 UGT2A1Q9Y4X1 527 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 LOC100131303A0A0U1RQF7 123 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 NME2P1O60361 137 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 B4GALT2O60909 372 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 SNAPINO95295 136 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 SLC4A1P02730 911 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 HSP90AA1P07900 732 aaKnown RBP1.18□□□□□ -2.22
SRP54-207ENST00000555535 HNF1AP20823 631 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 UQCRC2P22695 453 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 ACTA2P62736 377 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 ACTC1P68032 377 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 MRPS6P82932 125 aaKnown RBP1.18□□□□□ -2.22
SRP54-207ENST00000555535 CCZ1BP86790 482 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 CCZ1P86791 482 aaPredicted RBP1.18□□□□□ -2.22
SRP54-207ENST00000555535 YWHAHQ04917 246 aaPredicted RBP1.18□□□□□ -2.22
SRP54-207ENST00000555535 ST3GAL3Q11203 375 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 PARP6Q2NL67 630 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 AARDQ4LEZ3 155 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 LY6G6FQ5SQ64 297 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 SLC39A4Q6P5W5 647 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 RFLNAQ6ZTI6 216 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 C12orf56Q8IXR9 622 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 OR8H3Q8N146 312 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 PNKDQ8N490 385 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 OR6X1Q8NH79 312 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 BCL2L2Q92843 193 aaPredicted RBP1.18□□□□□ -2.22
SRP54-207ENST00000555535 C5orf30Q96GV9 206 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 NRIP2Q9BQI9 281 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 NDUFAF3Q9BU61 184 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 POLR2J2Q9GZM3 115 aaKnown RBP1.18□□□□□ -2.22
SRP54-207ENST00000555535 POLR2J3Q9H1A7 115 aaKnown RBP1.18□□□□□ -2.22
SRP54-207ENST00000555535 TRPV6Q9H1D0 765 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 MMADHCQ9H3L0 296 aaPredicted RBP1.18□□□□□ -2.22
SRP54-207ENST00000555535 CWC25Q9NXE8 425 aaPredicted RBP1.18□□□□□ -2.22
SRP54-207ENST00000555535 COPS7AQ9UBW8 275 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 ZNF229Q9UJW7 825 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 TEX264Q9Y6I9 313 aa1.18□□□□□ -2.22
SRP54-207ENST00000555535 TTC21BQ7Z4L5 1316 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 CCDC69A6NI79 296 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 TRIM3O75382 744 aaPredicted RBP1.17□□□□□ -2.22
SRP54-207ENST00000555535 AKAP3O75969 853 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 KIAA0754O94854 1291 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 C6orf47O95873 294 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 RHOXF2BP0C7M4 288 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 UROSP10746 265 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 CRISP2P16562 243 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 MARCKSP29966 332 aaPredicted RBP1.17□□□□□ -2.22
SRP54-207ENST00000555535 CTNNA1P35221 906 aaKnown RBP1.17□□□□□ -2.22
SRP54-207ENST00000555535 CTNNB1P35222 781 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 TNNT3P45378 269 aaPredicted RBP1.17□□□□□ -2.22
SRP54-207ENST00000555535 CASP9P55211 416 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 SH3BGRP55822 239 aaPredicted RBP1.17□□□□□ -2.22
SRP54-207ENST00000555535 NME5P56597 212 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 SRYQ05066 204 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 RCN2Q14257 317 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 ATXN7L3Q14CW9 347 aaPredicted RBP1.17□□□□□ -2.22
SRP54-207ENST00000555535 PSG5Q15238 335 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 ZSWIM7Q19AV6 140 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 ZNF674Q2M3X9 581 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 LRIT3Q3SXY7 679 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 PIGGQ5H8A4 983 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 ATF7IP2Q5U623 682 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 PRAMEF7Q5VXH5 474 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 NET1Q7Z628 596 aaPredicted RBP1.17□□□□□ -2.22
SRP54-207ENST00000555535 VRK2Q86Y07 508 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 ARRDC1Q8N5I2 433 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 ARFGAP2Q8N6H7 521 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 FIBINQ8TAL6 211 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 ST7LQ8TDW4 575 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 RAB7BQ96AH8 199 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 LINC00477Q96M19 166 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 DESI2Q9BSY9 194 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 MRPL9Q9BYD2 267 aaKnown RBP1.17□□□□□ -2.22
SRP54-207ENST00000555535 ULBP2Q9BZM5 246 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 ABCG4Q9H172 646 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 AKIRIN1Q9H9L7 192 aaPredicted RBP1.17□□□□□ -2.22
SRP54-207ENST00000555535 NDUFA13Q9P0J0 144 aa1.17□□□□□ -2.22
SRP54-207ENST00000555535 BTNL2Q9UIR0 455 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms