RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 CUL1Q13616 776 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 RUNX2Q13950 521 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 SERTAD2Q14140 314 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 RCAN2Q14206 197 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 EFTUD2Q15029 972 aaKnown RBP eCLIP4.38□□□□□ -1.71
ATXN3-228ENST00000554592 ETFDHQ16134 617 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 CLEC12BQ2HXU8 276 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 KRTAP24-1Q3LI83 254 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 SH2D4BQ5SQS7 431 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 DUPD1Q68J44 220 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 SUMO4Q6EEV6 95 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 LRRC8EQ6NSJ5 796 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 NEPROQ6NW34 567 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 AADACL2Q6P093 401 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 ZNF474Q6S9Z5 364 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-228ENST00000554592 SCIMPQ6UWF3 145 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 CENPUQ71F23 418 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 PIWIL4Q7Z3Z4 852 aaKnown RBP4.38□□□□□ -1.71
ATXN3-228ENST00000554592 RNF144BQ7Z419 303 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 ZNF321PQ8N8H1 164 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 C9orf106Q8NAJ2 232 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 SEMA6DQ8NFY4 1073 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 FAM110DQ8TAY7 271 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-228ENST00000554592 NUBPLQ8TB37 319 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 SLC22A8Q8TCC7 542 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 SLC5A11Q8WWX8 675 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 IGFBPL1Q8WX77 278 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 UCN3Q969E3 161 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 ABTB1Q969K4 478 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-228ENST00000554592 SPACA9Q96E40 222 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-228ENST00000554592 RNF125Q96EQ8 232 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 JSRP1Q96MG2 331 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-228ENST00000554592 DOHHQ9BU89 302 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 KIFC1Q9BW19 673 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 TM2D2Q9BX73 214 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 UGT2B28Q9BY64 529 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 CCDC68Q9H2F9 335 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 INTS10Q9NVR2 710 aaKnown RBP4.38□□□□□ -1.71
ATXN3-228ENST00000554592 KLHL28Q9NXS3 571 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 IFNKQ9P0W0 207 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 COPS7AQ9UBW8 275 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 PDE10AQ9Y233 779 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 MAD1L1Q9Y6D9 718 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 SCN2AQ99250 2005 aa4.38□□□□□ -1.71
ATXN3-228ENST00000554592 CTAGE9A4FU28 777 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 SH2D7A6NKC9 451 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-228ENST00000554592 C17orf100A8MU93 164 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 MCIDASD6RGH6 385 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 TP53I11O14683 189 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 SNX4O95219 450 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 ACTL6AO96019 429 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 IFNB1P01574 187 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 CYP4B1P13584 511 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 CPN1P15169 458 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 HOXB9P17482 250 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-228ENST00000554592 ZNF10P21506 573 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-228ENST00000554592 SAT1P21673 171 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 CHMP24386 653 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 ABCD3P28288 659 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 GCKP35557 465 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 CD79BP40259 229 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 MSH2P43246 934 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 RGS4P49798 205 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 RPS6KA3P51812 740 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 HNRNPFP52597 415 aaKnown RBP4.37□□□□□ -1.71
ATXN3-228ENST00000554592 NAP1L1P55209 391 aaKnown RBP4.37□□□□□ -1.71
ATXN3-228ENST00000554592 CRADDP78560 199 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 FAM27E3Q08E93 113 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 BIKQ13323 160 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 VEZF1Q14119 521 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 RBBP5Q15291 538 aaKnown RBP4.37□□□□□ -1.71
ATXN3-228ENST00000554592 BAK1Q16611 211 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 TOR1AIP1Q5JTV8 583 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 UBAP2Q5T6F2 1119 aaKnown RBP4.37□□□□□ -1.71
ATXN3-228ENST00000554592 PRAMEF20Q5VT98 475 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 ARMC3Q5W041 872 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 UGT3A1Q6NUS8 523 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 FAM180BQ6P0A1 224 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 CASC4Q6P4E1 433 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 CES3Q6UWW8 571 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 ZNF782Q6ZMW2 699 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-228ENST00000554592 C1orf122Q6ZSJ8 110 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 SH2D5Q6ZV89 423 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 LUZP1Q86V48 1076 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 CPNE9Q8IYJ1 553 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 MAPK1IP1LQ8NDC0 245 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 OR10G3Q8NGC4 313 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 ZNF721Q8TF20 911 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 SLC44A1Q8WWI5 657 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 ATL1Q8WXF7 558 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 PYCR2Q96C36 320 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 INTS12Q96CB8 462 aaKnown RBP4.37□□□□□ -1.71
ATXN3-228ENST00000554592 ZBED6CLQ96FA7 236 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-228ENST00000554592 RBM18Q96H35 190 aaKnown RBP4.37□□□□□ -1.71
ATXN3-228ENST00000554592 SENP5Q96HI0 755 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-228ENST00000554592 APOPT1Q96IL0 206 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 ADAD1Q96M93 576 aaKnown RBP4.37□□□□□ -1.71
ATXN3-228ENST00000554592 GPR21Q99679 349 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 AIF1LQ9BQI0 150 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 SLC39A3Q9BRY0 314 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms