RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 CLEC2AQ6UVW9 174 aa12.6□□□□□ -0.39
CHMP1A-210ENST00000551981 FCRLAQ7L513 359 aa12.6□□□□□ -0.39
CHMP1A-210ENST00000551981 SZRD1Q7Z422 152 aa12.6□□□□□ -0.39
CHMP1A-210ENST00000551981 DTX2Q86UW9 622 aa12.6□□□□□ -0.39
CHMP1A-210ENST00000551981 OR6Y1Q8NGX8 325 aa12.6□□□□□ -0.39
CHMP1A-210ENST00000551981 POC1BQ8TC44 478 aa12.6□□□□□ -0.39
CHMP1A-210ENST00000551981 DCAKDQ8WVC6 231 aa12.6□□□□□ -0.39
CHMP1A-210ENST00000551981 HOXB13Q92826 284 aaPredicted RBP12.6□□□□□ -0.39
CHMP1A-210ENST00000551981 NPAS1Q99742 590 aa12.6□□□□□ -0.39
CHMP1A-210ENST00000551981 BEX2Q9BXY8 128 aa12.6□□□□□ -0.39
CHMP1A-210ENST00000551981 AMBRA1Q9C0C7 1298 aa12.6□□□□□ -0.39
CHMP1A-210ENST00000551981 MID1IP1Q9NPA3 183 aa12.6□□□□□ -0.39
CHMP1A-210ENST00000551981 LPAR3Q9UBY5 353 aa12.6□□□□□ -0.39
CHMP1A-210ENST00000551981 A0A1W2PQD3 144 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 DPRXA6NFQ7 191 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 PDPK1O15530 556 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 KCNK2O95069 426 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 NTN1O95631 604 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 HSPA4LO95757 839 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 CD8AP01732 235 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 LINGO3P0C6S8 592 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 CASQ1P31415 396 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 MAP3K8P41279 467 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 SERPINB4P48594 390 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 PRKAG1P54619 331 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 MANFP55145 182 aaKnown RBP12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 PPA1Q15181 289 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 STK11Q15831 433 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 TMEM249Q2WGJ8 235 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 NOXRED1Q6NXP6 359 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 Q6ZT83 130 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 ZNF551Q7Z340 670 aaPredicted RBP12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 ATG4DQ86TL0 474 aaPredicted RBP12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 SLC43A2Q8N370 569 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 NUP43Q8NFH3 380 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 ZFP28Q8NHY6 868 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 MUCL1Q96DR8 90 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 L3HYPDHQ96EM0 354 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 RADILQ96JH8 1075 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 MS4A4EQ96PG1 132 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 KCNK17Q96T54 332 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 SRXN1Q9BYN0 137 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 TMEM160Q9NX00 188 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 TMEM216Q9P0N5 145 aa12.59□□□□□ -0.39
CHMP1A-210ENST00000551981 SVEP1Q4LDE5 3571 aa12.58□□□□□ -0.4
CHMP1A-210ENST00000551981 IGHV4-30-2A0A087WSY4 118 aa12.58□□□□□ -0.4
CHMP1A-210ENST00000551981 FAM234BA2RU67 622 aa12.58□□□□□ -0.4
CHMP1A-210ENST00000551981 KIF2AO00139 706 aaPredicted RBP12.58□□□□□ -0.4
CHMP1A-210ENST00000551981 GPRIN2O60269 458 aa12.58□□□□□ -0.4
CHMP1A-210ENST00000551981 RAMP1O60894 148 aa12.58□□□□□ -0.4
CHMP1A-210ENST00000551981 CRCPO75575 148 aa12.58□□□□□ -0.4
CHMP1A-210ENST00000551981 RSL1D1O76021 490 aaKnown RBP12.58□□□□□ -0.4
CHMP1A-210ENST00000551981 PRIM2P49643 509 aa12.58□□□□□ -0.4
CHMP1A-210ENST00000551981 C21orf58P58505 322 aa12.58□□□□□ -0.4
CHMP1A-210ENST00000551981 FOXF1Q12946 379 aa12.58□□□□□ -0.4
CHMP1A-210ENST00000551981 SEZ6L2Q6UXD5 910 aa12.58□□□□□ -0.4
CHMP1A-210ENST00000551981 ZNF572Q7Z3I7 529 aaPredicted RBP12.58□□□□□ -0.4
CHMP1A-210ENST00000551981 COX18Q8N8Q8 333 aa12.58□□□□□ -0.4
CHMP1A-210ENST00000551981 FBXO30Q8TB52 745 aa12.58□□□□□ -0.4
CHMP1A-210ENST00000551981 FAM110BQ8TC76 370 aa12.58□□□□□ -0.4
CHMP1A-210ENST00000551981 TNFRSF13CQ96RJ3 184 aa12.58□□□□□ -0.4
CHMP1A-210ENST00000551981 RRAGDQ9NQL2 400 aaPredicted RBP12.58□□□□□ -0.4
CHMP1A-210ENST00000551981 PLCE1Q9P212 2302 aa12.58□□□□□ -0.4
CHMP1A-210ENST00000551981 KLHL9Q9P2J3 617 aa12.58□□□□□ -0.4
CHMP1A-210ENST00000551981 B3GALT5Q9Y2C3 310 aa12.58□□□□□ -0.4
CHMP1A-210ENST00000551981 A0A087WUV0 522 aaPredicted RBP12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 EXOC1LA0A1B0GW35 172 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 SHISA9B4DS77 424 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 H3BQF6 201 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 ZNF195O14628 629 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 ABCD4O14678 606 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 LYZL6O75951 148 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 NUDT14O95848 222 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 ALOX5P09917 674 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 ACP2P11117 423 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 SHC1P29353 583 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 OR3A2P47893 321 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 FOXA1P55317 472 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 VLDLRP98155 873 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 CKAP4Q07065 602 aaKnown RBP12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 LOXL1Q08397 574 aaPredicted RBP12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 TMEM176BQ3YBM2 270 aaPredicted RBP12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 ZCCHC12Q6PEW1 402 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 TIFABQ6ZNK6 161 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 TRIM46Q7Z4K8 759 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 MTERF4Q7Z6M4 381 aaKnown RBP12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 P2RY8Q86VZ1 359 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 CCNYL1Q8N7R7 359 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 ZNF527Q8NB42 609 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 OR10H5Q8NGA6 315 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 FBXO27Q8NI29 283 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 ZNF764Q96H86 408 aaPredicted RBP12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 METTL2AQ96IZ6 378 aaKnown RBP12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 GSTO2Q9H4Y5 243 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 GRPEL1Q9HAV7 217 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 PYCARDQ9ULZ3 195 aa12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 GPC6Q9Y625 555 aaPredicted RBP12.57□□□□□ -0.4
CHMP1A-210ENST00000551981 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.57□□□□□ -0.46e-9■■■□□ 14.9
CHMP1A-210ENST00000551981 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms