RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 ADOQ96SZ5 270 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 HOPXQ9BPY8 73 aaPredicted RBP12.16□□□□□ -0.46
NUP188-211ENST00000550219 SLC35A5Q9BS91 424 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 OR2B2Q9GZK3 357 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 DDX18Q9NVP1 670 aaKnown RBP12.16□□□□□ -0.46
NUP188-211ENST00000550219 GPATCH2Q9NW75 528 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 FOXD3Q9UJU5 478 aaPredicted RBP12.16□□□□□ -0.46
NUP188-211ENST00000550219 FBXL2Q9UKC9 423 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 WIF1Q9Y5W5 379 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 SNX8Q9Y5X2 465 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 HIVEP1P15822 2718 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 RNF103-CHMP3A0A140T963 221 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 CLCA1A8K7I4 914 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 C17orf51A8MQB3 221 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 SCO2O43819 266 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 COQ9O75208 318 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 ANP32DO95626 131 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 KRT75O95678 551 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 C1QCP02747 245 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 KRT16P08779 473 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 DRD5P21918 477 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 SOAT1P35610 550 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 CPOXP36551 454 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 MAGEA8P43361 318 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 STARP49675 285 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 NUDT2P50583 147 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 MVDP53602 400 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 FOXF2Q12947 444 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 SNTA1Q13424 505 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 SPDYE7PQ495Y7 208 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 OR5M10Q6IEU7 315 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 NANOGP8Q6NSW7 305 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 ZCCHC12Q6PEW1 402 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 BHLHB9Q6PI77 547 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 C6orf120Q7Z4R8 191 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 KIF18BQ86Y91 864 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 PLCZ1Q86YW0 608 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 CLEC4FQ8N1N0 589 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 WDSUB1Q8N9V3 476 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 OR8J3Q8NGG0 315 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 OR5AK3PQ8NH89 298 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 FBXO27Q8NI29 283 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 MIPOL1Q8TD10 442 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 EFHD2Q96C19 240 aaPredicted RBP12.15□□□□□ -0.46
NUP188-211ENST00000550219 INTS12Q96CB8 462 aaKnown RBP12.15□□□□□ -0.46
NUP188-211ENST00000550219 NTNG2Q96CW9 530 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 AURKBQ96GD4 344 aaPredicted RBP12.15□□□□□ -0.46
NUP188-211ENST00000550219 VSTM2LQ96N03 204 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 SFXN2Q96NB2 322 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 MS4A4EQ96PG1 132 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 BTBD9Q96Q07 612 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 FOXC2Q99958 501 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 CPPED1Q9BRF8 314 aaPredicted RBP12.15□□□□□ -0.46
NUP188-211ENST00000550219 YIPF4Q9BSR8 244 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 RBM24Q9BX46 236 aaKnown RBP12.15□□□□□ -0.46
NUP188-211ENST00000550219 C1orf21Q9H246 121 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 NANOGQ9H9S0 305 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 TPT1P8Q9HAU6 139 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 FOLH1BQ9HBA9 442 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 ZCCHC3Q9NUD5 404 aaKnown RBP12.15□□□□□ -0.46
NUP188-211ENST00000550219 TAS2R10Q9NYW0 307 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 RPH3AQ9Y2J0 694 aaPredicted RBP12.15□□□□□ -0.46
NUP188-211ENST00000550219 GPR55Q9Y2T6 319 aaPredicted RBP12.15□□□□□ -0.46
NUP188-211ENST00000550219 OR10H1Q9Y4A9 318 aa12.15□□□□□ -0.46
NUP188-211ENST00000550219 NUP214P35658 2090 aaPredicted RBP12.15□□□□□ -0.46
NUP188-211ENST00000550219 OR6C70A6NIJ9 312 aa12.14□□□□□ -0.47
NUP188-211ENST00000550219 TTC36A6NLP5 189 aa12.14□□□□□ -0.47
NUP188-211ENST00000550219 B2RBV5 119 aa12.14□□□□□ -0.47
NUP188-211ENST00000550219 CLIC1O00299 241 aa12.14□□□□□ -0.47
NUP188-211ENST00000550219 TO15178 435 aa12.14□□□□□ -0.47
NUP188-211ENST00000550219 CBR3O75828 277 aa12.14□□□□□ -0.47
NUP188-211ENST00000550219 ATP5HO75947 161 aa12.14□□□□□ -0.47
NUP188-211ENST00000550219 HMGN2P05204 90 aaKnown RBP12.14□□□□□ -0.47
NUP188-211ENST00000550219 GPX2P18283 190 aa12.14□□□□□ -0.47
NUP188-211ENST00000550219 PPIBP23284 216 aaKnown RBP12.14□□□□□ -0.47
NUP188-211ENST00000550219 SLC6A2P23975 617 aa12.14□□□□□ -0.47
NUP188-211ENST00000550219 TXNL4AP83876 142 aaKnown RBP12.14□□□□□ -0.47
NUP188-211ENST00000550219 CAPRIN1Q14444 709 aaKnown RBP12.14□□□□□ -0.47
NUP188-211ENST00000550219 MFSD12Q6NUT3 480 aa12.14□□□□□ -0.47
NUP188-211ENST00000550219 PAMR1Q6UXH9 720 aa12.14□□□□□ -0.47
NUP188-211ENST00000550219 TGIF2LYQ8IUE0 185 aa12.14□□□□□ -0.47
NUP188-211ENST00000550219 GRAMD2AQ8IUY3 354 aa12.14□□□□□ -0.47
NUP188-211ENST00000550219 SLC44A2Q8IWA5 706 aaPredicted RBP12.14□□□□□ -0.47
NUP188-211ENST00000550219 RBM15BQ8NDT2 890 aaKnown RBP12.14□□□□□ -0.47
NUP188-211ENST00000550219 OR4K17Q8NGC6 315 aa12.14□□□□□ -0.47
NUP188-211ENST00000550219 ZPLD1Q8TCW7 415 aa12.14□□□□□ -0.47
NUP188-211ENST00000550219 SLC7A6OSQ96CW6 309 aaPredicted RBP12.14□□□□□ -0.47
NUP188-211ENST00000550219 SLC35A4Q96G79 324 aa12.14□□□□□ -0.47
NUP188-211ENST00000550219 SLC39A3Q9BRY0 314 aa12.14□□□□□ -0.47
NUP188-211ENST00000550219 LMF2Q9BU23 707 aaKnown RBP12.14□□□□□ -0.47
NUP188-211ENST00000550219 SERHL2Q9H4I8 314 aa12.14□□□□□ -0.47
NUP188-211ENST00000550219 IKZF5Q9H5V7 419 aa12.14□□□□□ -0.47
NUP188-211ENST00000550219 CALHM2Q9HA72 323 aa12.14□□□□□ -0.47
NUP188-211ENST00000550219 GALNT8Q9NY28 637 aa12.14□□□□□ -0.47
NUP188-211ENST00000550219 TAS2R1Q9NYW7 299 aa12.14□□□□□ -0.47
NUP188-211ENST00000550219 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.14□□□□□ -0.47
NUP188-211ENST00000550219 FREM3P0C091 2139 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 TSPAN2O60636 221 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 HNRNPCL1O60812 293 aaKnown RBP12.13□□□□□ -0.47
NUP188-211ENST00000550219 ABCB7O75027 752 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms