RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 LRTM1Q9HBL6 345 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 HHATLQ9HCP6 504 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 C1orf109Q9NX04 203 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 SH3BP4Q9P0V3 963 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 PSMC3IPQ9P2W1 217 aaPredicted RBP13.71□□□□□ -0.21
RAB5C-205ENST00000550013 DCDC2Q9UHG0 476 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 MAGED1Q9Y5V3 778 aaPredicted RBP13.71□□□□□ -0.21
RAB5C-205ENST00000550013 NUP214P35658 2090 aaPredicted RBP13.7□□□□□ -0.22
RAB5C-205ENST00000550013 SCDO00767 359 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 CD3EP07766 207 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 ALOX5P09917 674 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 UROSP10746 265 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 HPGDP15428 266 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 PRPH2P23942 346 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 IL32P24001 234 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 ACVR1BP36896 505 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 FRKP42685 505 aaPredicted RBP13.7□□□□□ -0.22
RAB5C-205ENST00000550013 ZNF117Q03924 483 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 FAPQ12884 760 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 CFAP157Q5JU67 520 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 EXOSC6Q5RKV6 272 aaKnown RBP13.7□□□□□ -0.22
RAB5C-205ENST00000550013 TMEM201Q5SNT2 666 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 SFRP5Q5T4F7 317 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 HEPHL1Q6MZM0 1159 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 SEZ6L2Q6UXD5 910 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 TRMT10CQ7L0Y3 403 aaKnown RBP13.7□□□□□ -0.22
RAB5C-205ENST00000550013 MISPQ8IVT2 679 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 COX18Q8N8Q8 333 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 KBTBD8Q8NFY9 601 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 OR2T11Q8NH01 316 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 SMAP2Q8WU79 429 aaPredicted RBP13.7□□□□□ -0.22
RAB5C-205ENST00000550013 JADE3Q92613 823 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 GTPBP3Q969Y2 492 aaKnown RBP13.7□□□□□ -0.22
RAB5C-205ENST00000550013 ZBED6CLQ96FA7 236 aaPredicted RBP13.7□□□□□ -0.22
RAB5C-205ENST00000550013 TRMT61AQ96FX7 289 aaKnown RBP13.7□□□□□ -0.22
RAB5C-205ENST00000550013 ZNF764Q96H86 408 aaPredicted RBP13.7□□□□□ -0.22
RAB5C-205ENST00000550013 METTL2AQ96IZ6 378 aaKnown RBP13.7□□□□□ -0.22
RAB5C-205ENST00000550013 FCRL1Q96LA6 429 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 CCT7Q99832 543 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 HDHD5Q9BXW7 423 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 C12orf65Q9H3J6 166 aaKnown RBP13.7□□□□□ -0.22
RAB5C-205ENST00000550013 KLHL13Q9P2N7 655 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 BAIAP2L1Q9UHR4 511 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 LIPT1Q9Y234 373 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 CUBNO60494 3623 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 ALPK2Q86TB3 2170 aa13.7□□□□□ -0.22
RAB5C-205ENST00000550013 NPIPA5A0A0B4J1W7 369 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 A0A1W2PQD3 144 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 NPIPA7E9PJI5 369 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 H3BQF6 201 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 SLC28A1O00337 649 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 TBX19O60806 448 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 NDUFS7O75251 213 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 GLRA3O75311 464 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 ADAP00813 363 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 IGHV4-39P01824 125 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 PABPC4LP0CB38 370 aaKnown RBP13.69□□□□□ -0.22
RAB5C-205ENST00000550013 NPIPA8P0DM63 369 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 IDUAP35475 653 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 DNAJB13P59910 316 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 PDE7AQ13946 482 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 RNPS1Q15287 305 aaKnown RBP13.69□□□□□ -0.22
RAB5C-205ENST00000550013 ZNF672Q499Z4 452 aaPredicted RBP13.69□□□□□ -0.22
RAB5C-205ENST00000550013 Q6ZSR9 355 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 BANPQ8N9N5 519 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 FBXO27Q8NI29 283 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 PHOSPHO1Q8TCT1 267 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 CDS1Q92903 461 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 CPNE4Q96A23 557 aaPredicted RBP13.69□□□□□ -0.22
RAB5C-205ENST00000550013 REXO5Q96IC2 774 aaKnown RBP13.69□□□□□ -0.22
RAB5C-205ENST00000550013 BTBD2Q9BX70 525 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 SLCO5A1Q9H2Y9 848 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 ESRP2Q9H6T0 727 aaKnown RBP13.69□□□□□ -0.22
RAB5C-205ENST00000550013 COQ10BQ9H8M1 238 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 ACSS1Q9NUB1 689 aaPredicted RBP13.69□□□□□ -0.22
RAB5C-205ENST00000550013 GIN1Q9NXP7 522 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 FIS1Q9Y3D6 152 aa13.69□□□□□ -0.22
RAB5C-205ENST00000550013 PLCE1Q9P212 2302 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 IGHV3-15A0A0B4J1V0 119 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 A0A1W2PP18 115 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 DPRXA6NFQ7 191 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 ZNF195O14628 629 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 RGS14O43566 566 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 PLIN3O60664 434 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 NUDT14O95848 222 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 FAM153BP0C7A2 387 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 ELK4P28324 431 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 ADH6P28332 368 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 LCN1P31025 176 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 EIF1P41567 113 aaKnown RBP13.68□□□□□ -0.22
RAB5C-205ENST00000550013 SERPINB4P48594 390 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 NAA20P61599 178 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 RPL38P63173 70 aaKnown RBP13.68□□□□□ -0.22
RAB5C-205ENST00000550013 POU6F2P78424 691 aaPredicted RBP13.68□□□□□ -0.22
RAB5C-205ENST00000550013 BSPH1Q075Z2 132 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 TOMM34Q15785 309 aaPredicted RBP13.68□□□□□ -0.22
RAB5C-205ENST00000550013 ETFDHQ16134 617 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 PGGHGQ32M88 737 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 NDUFAF6Q330K2 333 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 TMEM176BQ3YBM2 270 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms