RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 SORT1Q99523 831 aa10.91□□□□□ -0.66
DDX54-206ENST00000549271 C1orf50Q9BV19 199 aa10.91□□□□□ -0.66
DDX54-206ENST00000549271 DSN1Q9H410 356 aa10.91□□□□□ -0.66
DDX54-206ENST00000549271 PTGES2Q9H7Z7 377 aa10.91□□□□□ -0.66
DDX54-206ENST00000549271 KCNK9Q9NPC2 374 aa10.91□□□□□ -0.66
DDX54-206ENST00000549271 ACSS1Q9NUB1 689 aaPredicted RBP10.91□□□□□ -0.66
DDX54-206ENST00000549271 DDX18Q9NVP1 670 aaKnown RBP10.91□□□□□ -0.66
DDX54-206ENST00000549271 FAM120CQ9NX05 1096 aaKnown RBP10.91□□□□□ -0.66
DDX54-206ENST00000549271 FLRT3Q9NZU0 649 aa10.91□□□□□ -0.66
DDX54-206ENST00000549271 ZNF337Q9Y3M9 751 aa10.91□□□□□ -0.66
DDX54-206ENST00000549271 MALRD1Q5VYJ5 2156 aa10.91□□□□□ -0.66
DDX54-206ENST00000549271 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 GXYLT2A0PJZ3 443 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 OR2M5A3KFT3 312 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 TTC36A6NLP5 189 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 C17orf51A8MQB3 221 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 TMEM114B3SHH9 223 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 SCAMP2O15127 329 aaKnown RBP10.9□□□□□ -0.66
DDX54-206ENST00000549271 IL33O95760 270 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 IGKV1D-16P01601 117 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 IGHV4-39P01824 125 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 LAMP1P11279 417 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 PRPS2P11908 318 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 HK1P19367 917 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 EFNA1P20827 205 aaPredicted RBP10.9□□□□□ -0.66
DDX54-206ENST00000549271 GABRA3P34903 492 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 SUCLG1P53597 346 aaKnown RBP10.9□□□□□ -0.66
DDX54-206ENST00000549271 PTGR1Q14914 329 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 DECR1Q16698 335 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 TMEM44Q2T9K0 475 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 TMEM249Q2WGJ8 235 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 ATP6AP1LQ52LC2 224 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 BEND6Q5SZJ8 279 aaPredicted RBP10.9□□□□□ -0.66
DDX54-206ENST00000549271 IL23RQ5VWK5 629 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 ANKRD34AQ69YU3 496 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 ADAM5Q6NVV9 412 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 R3HCC1LQ7Z5L2 792 aaKnown RBP10.9□□□□□ -0.66
DDX54-206ENST00000549271 CROCCP2Q86T23 111 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 RIMKLAQ8IXN7 391 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 UBQLNLQ8IYU4 475 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 METTL25Q8N6Q8 603 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 ZNF781Q8N8C0 355 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 CNEP1R1Q8N9A8 125 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 NUP43Q8NFH3 380 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 AKAP1Q92667 903 aaKnown RBP eCLIP10.9□□□□□ -0.66
DDX54-206ENST00000549271 C1GALT1C1Q96EU7 318 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 GIMAP5Q96F15 307 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 ZNF845Q96IR2 970 aaPredicted RBP10.9□□□□□ -0.66
DDX54-206ENST00000549271 KCNK17Q96T54 332 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 RTN4RQ9BZR6 473 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 SIRT3Q9NTG7 399 aaPredicted RBP10.9□□□□□ -0.66
DDX54-206ENST00000549271 HAO1Q9UJM8 370 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 MRTO4Q9UKD2 239 aaKnown RBP10.9□□□□□ -0.66
DDX54-206ENST00000549271 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.9□□□□□ -0.66
DDX54-206ENST00000549271 AP4B1Q9Y6B7 739 aa10.9□□□□□ -0.66
DDX54-206ENST00000549271 SCO2O43819 266 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 HSPA4LO95757 839 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 SOD3P08294 240 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 DANCRP0C864 163 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 FCGR2AP12318 317 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 IL11P20809 199 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 TBXA2RP21731 343 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 BGNP21810 368 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 MAPK1P28482 360 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 CDKN1AP38936 164 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 KCNJ5P48544 419 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 SLC1A6P48664 564 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 CLK3P49761 638 aaKnown RBP10.89□□□□□ -0.67
DDX54-206ENST00000549271 PSMD4P55036 377 aaKnown RBP10.89□□□□□ -0.67
DDX54-206ENST00000549271 WDR4P57081 412 aaKnown RBP10.89□□□□□ -0.67
DDX54-206ENST00000549271 RPS3AP61247 264 aaKnown RBP10.89□□□□□ -0.67
DDX54-206ENST00000549271 VLDLRP98155 873 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 EMX2Q04743 252 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 MLC1Q15049 377 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 EXOSC6Q5RKV6 272 aaKnown RBP10.89□□□□□ -0.67
DDX54-206ENST00000549271 RAET1LQ5VY80 246 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 FAM214BQ7L5A3 538 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 KRTCAP2Q8N6L1 136 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 FNDC5Q8NAU1 212 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 LILRB1Q8NHL6 650 aaPredicted RBP10.89□□□□□ -0.67
DDX54-206ENST00000549271 CEP70Q8NHQ1 597 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 ZFP28Q8NHY6 868 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 FNDC9Q8TBE3 224 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 PIK3R3Q92569 461 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 TUBGCP3Q96CW5 907 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 COQ8BQ96D53 544 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 PLPPR2Q96GM1 343 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 C16orf58Q96GQ5 468 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 PINK1Q9BXM7 581 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 SHARPINQ9H0F6 387 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 ESRP2Q9H6T0 727 aaKnown RBP10.89□□□□□ -0.67
DDX54-206ENST00000549271 AKTIPQ9H8T0 292 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 HHATLQ9HCP6 504 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 Q9N2J8 555 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 EQTNQ9NQ60 294 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 MED11Q9P086 117 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 RAP2CQ9Y3L5 183 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 ALPK2Q86TB3 2170 aa10.89□□□□□ -0.67
DDX54-206ENST00000549271 H0YC42 278 aa10.88□□□□□ -0.67
DDX54-206ENST00000549271 NDUFS7O75251 213 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms