RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 SDF2Q99470 211 aa16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 FOXC2Q99958 501 aa16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 SLC39A3Q9BRY0 314 aa16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 LIME1Q9H400 295 aa16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 ELOVL5Q9NYP7 299 aa16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 PRSS51A0A1B0GVH4 220 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 CASKO14936 926 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 ANKRD28O15084 1053 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 SCN2BO60939 215 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 AQP8O94778 261 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 AK1P00568 194 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 LBPP18428 481 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 MATN1P21941 496 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 ADH6P28332 368 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 SOAT1P35610 550 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 P2RX1P51575 399 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 ZNF117Q03924 483 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 FAM27E3Q08E93 113 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 BST1Q10588 318 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 DPY19L1Q2PZI1 675 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 CTU2Q2VPK5 515 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 ANXA8L1Q5VT79 327 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 HHATQ5VTY9 493 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 OGFOD2Q6N063 350 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 CLECL1Q8IZS7 167 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 CHDHQ8NE62 594 aaPredicted RBP16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 OR10D3Q8NH80 312 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 POC1BQ8TC44 478 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 NPAS1Q99742 590 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 NUF2Q9BZD4 464 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 PRRG4Q9BZD6 226 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 CXXC4Q9H2H0 198 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 MEAF6Q9HAF1 191 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 CCM2LQ9NUG4 571 aaPredicted RBP16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 MCTS1Q9ULC4 181 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 ICAM5Q9UMF0 924 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 DTNAQ9Y4J8 743 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 AKAP9Q99996 3911 aa16.74■□□□□ 0.27
CHMP1A-203ENST00000547614 MED13LQ71F56 2210 aa16.73■□□□□ 0.27
CHMP1A-203ENST00000547614 IL11P20809 199 aa16.73■□□□□ 0.27
CHMP1A-203ENST00000547614 DNASE1P24855 282 aa16.73■□□□□ 0.27
CHMP1A-203ENST00000547614 ELK4P28324 431 aa16.73■□□□□ 0.27
CHMP1A-203ENST00000547614 CPOXP36551 454 aa16.73■□□□□ 0.27
CHMP1A-203ENST00000547614 CLNS1AP54105 237 aaKnown RBP16.73■□□□□ 0.27
CHMP1A-203ENST00000547614 SLC18A1P54219 525 aa16.73■□□□□ 0.27
CHMP1A-203ENST00000547614 SIRPAP78324 504 aa16.73■□□□□ 0.27
CHMP1A-203ENST00000547614 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.73■□□□□ 0.273e-8■■■■■ 30.7
CHMP1A-203ENST00000547614 PDSS1Q5T2R2 415 aa16.73■□□□□ 0.27
CHMP1A-203ENST00000547614 ZNF474Q6S9Z5 364 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-203ENST00000547614 CBLN3Q6UW01 205 aa16.73■□□□□ 0.27
CHMP1A-203ENST00000547614 OR5D16Q8NGK9 328 aa16.73■□□□□ 0.27
CHMP1A-203ENST00000547614 OR2V1Q8NHB1 315 aa16.73■□□□□ 0.27
CHMP1A-203ENST00000547614 MIPOL1Q8TD10 442 aa16.73■□□□□ 0.27
CHMP1A-203ENST00000547614 PAIP2Q9BPZ3 127 aaKnown RBP16.73■□□□□ 0.27
CHMP1A-203ENST00000547614 KLHDC3Q9BQ90 382 aa16.73■□□□□ 0.27
CHMP1A-203ENST00000547614 NMUR2Q9GZQ4 415 aa16.73■□□□□ 0.27
CHMP1A-203ENST00000547614 OPN3Q9H1Y3 402 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-203ENST00000547614 GLRX2Q9NS18 164 aa16.73■□□□□ 0.27
CHMP1A-203ENST00000547614 PNPOQ9NVS9 261 aa16.73■□□□□ 0.27
CHMP1A-203ENST00000547614 GPC6Q9Y625 555 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-203ENST00000547614 HRNRQ86YZ3 2850 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 NPIPA5A0A0B4J1W7 369 aa16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 A0A0J9YW62 118 aa16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 RNF103-CHMP3A0A140T963 221 aa16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 NPIPA7E9PJI5 369 aa16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 GTPBP1O00178 669 aaKnown RBP16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 EIF4E2O60573 245 aaKnown RBP16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 STX11O75558 287 aa16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 AGR2O95994 175 aa16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 HRGP04196 525 aa16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 NPIPA8P0DM63 369 aa16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 WDR4P57081 412 aaKnown RBP16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 PHC1P78364 1004 aa16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 AP1ARQ63HQ0 302 aa16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 LILRA2Q8N149 483 aa16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 OR4A15Q8NGL6 344 aa16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 GMPPAQ96IJ6 420 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 SERHL2Q9H4I8 314 aa16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 PLEKHF2Q9H8W4 249 aa16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 PLSCR4Q9NRQ2 329 aa16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 EXD2Q9NVH0 621 aa16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 PROCRQ9UNN8 238 aa16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 CARD8Q9Y2G2 431 aa16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 EMC9Q9Y3B6 208 aa16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 TESMINQ9Y4I5 508 aa16.72■□□□□ 0.27
CHMP1A-203ENST00000547614 TMEM120BA0PK00 339 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 CXCL13O43927 109 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 SYNGR4O95473 234 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 NUDT14O95848 222 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 GUSBP08236 651 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 POU2F1P14859 743 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 UQCRC2P22695 453 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 UGT2B10P36537 528 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 SLC6A8P48029 635 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 RPS26P62854 115 aaKnown RBP16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 CASP8Q14790 479 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 ZNF141Q15928 474 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 ARHGAP11BQ3KRB8 267 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 HBMQ6B0K9 141 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 GTF2IRD2BQ6EKJ0 949 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms