RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 GNPDA1P46926 289 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 HTR5AP47898 357 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 LIM2P55344 173 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 BDH1Q02338 343 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 PAX5Q02548 391 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 CDKN3Q16667 212 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 OR8G2PQ6IF36 304 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 WDR74Q6RFH5 385 aaPredicted RBP2.24□□□□□ -2.05
CCDC38-204ENST00000546816 OR2AP1Q8NGE2 309 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 C14orf79Q96F83 325 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 MBOAT4Q96T53 435 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 TXN2Q99757 166 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 ACAT2Q9BWD1 397 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 TMEM231Q9H6L2 316 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 KAT8Q9H7Z6 458 aaKnown RBP2.24□□□□□ -2.05
CCDC38-204ENST00000546816 SYTL2Q9HCH5 934 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 NANSQ9NR45 359 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 SCML2Q9UQR0 700 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 CDH10Q9Y6N8 788 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 CUX2O14529 1486 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 MTCL1Q9Y4B5 1905 aaKnown RBP2.23□□□□□ -2.05
CCDC38-204ENST00000546816 SYCE3A1L190 88 aa2.23□□□□□ -2.05
CCDC38-204ENST00000546816 PSMB11A5LHX3 300 aa2.23□□□□□ -2.05
CCDC38-204ENST00000546816 WASH3PC4AMC7 463 aa2.23□□□□□ -2.05
CCDC38-204ENST00000546816 LGALS8O00214 317 aa2.23□□□□□ -2.05
CCDC38-204ENST00000546816 DLGAP1O14490 977 aa2.23□□□□□ -2.05
CCDC38-204ENST00000546816 ICOSLGO75144 302 aa2.23□□□□□ -2.05
CCDC38-204ENST00000546816 NPIPB7O75200 414 aa2.23□□□□□ -2.05
CCDC38-204ENST00000546816 IGHV4-34P06331 123 aa2.23□□□□□ -2.05
CCDC38-204ENST00000546816 CCDC192P0DO97 292 aa2.23□□□□□ -2.05
CCDC38-204ENST00000546816 UGT1A5P35504 534 aa2.23□□□□□ -2.05
CCDC38-204ENST00000546816 OSTNP61366 133 aa2.23□□□□□ -2.05
CCDC38-204ENST00000546816 RPL8P62917 257 aaKnown RBP2.23□□□□□ -2.05
CCDC38-204ENST00000546816 TFDP1Q14186 410 aa2.23□□□□□ -2.05
CCDC38-204ENST00000546816 WASH2PQ6VEQ5 465 aa2.23□□□□□ -2.05
CCDC38-204ENST00000546816 STKLD1Q8NE28 680 aa2.23□□□□□ -2.05
CCDC38-204ENST00000546816 OR52E1Q8NGJ3 308 aa2.23□□□□□ -2.05
CCDC38-204ENST00000546816 BLOC1S5Q8TDH9 187 aa2.23□□□□□ -2.05
CCDC38-204ENST00000546816 SLC13A3Q8WWT9 602 aa2.23□□□□□ -2.05
CCDC38-204ENST00000546816 CAB39LQ9H9S4 337 aa2.23□□□□□ -2.05
CCDC38-204ENST00000546816 SH2D2AQ9NP31 389 aa2.23□□□□□ -2.05
CCDC38-204ENST00000546816 FANCFQ9NPI8 374 aa2.23□□□□□ -2.05
CCDC38-204ENST00000546816 ANO10Q9NW15 660 aa2.23□□□□□ -2.05
CCDC38-204ENST00000546816 CNOT2Q9NZN8 540 aaKnown RBP2.23□□□□□ -2.05
CCDC38-204ENST00000546816 IL20RAQ9UHF4 553 aa2.23□□□□□ -2.05
CCDC38-204ENST00000546816 ZSCAN5BA6NJL1 495 aa2.22□□□□□ -2.05
CCDC38-204ENST00000546816 CSF2P04141 144 aa2.22□□□□□ -2.05
CCDC38-204ENST00000546816 ANXA4P09525 319 aaPredicted RBP2.22□□□□□ -2.05
CCDC38-204ENST00000546816 RCC1P18754 421 aaPredicted RBP2.22□□□□□ -2.05
CCDC38-204ENST00000546816 SFNP31947 248 aa2.22□□□□□ -2.05
CCDC38-204ENST00000546816 GCKP35557 465 aa2.22□□□□□ -2.05
CCDC38-204ENST00000546816 PTGES3Q15185 160 aaKnown RBP2.22□□□□□ -2.05
CCDC38-204ENST00000546816 SLC10A5Q5PT55 438 aa2.22□□□□□ -2.05
CCDC38-204ENST00000546816 SCYL2Q6P3W7 929 aa2.22□□□□□ -2.05
CCDC38-204ENST00000546816 SYT10Q6XYQ8 523 aa2.22□□□□□ -2.05
CCDC38-204ENST00000546816 ZFP2Q6ZN57 461 aa2.22□□□□□ -2.05
CCDC38-204ENST00000546816 C1orf186Q6ZWK4 172 aa2.22□□□□□ -2.05
CCDC38-204ENST00000546816 MINDY2Q8NBR6 621 aa2.22□□□□□ -2.05
CCDC38-204ENST00000546816 MDS2Q8NDY4 140 aa2.22□□□□□ -2.05
CCDC38-204ENST00000546816 GIPC3Q8TF64 312 aa2.22□□□□□ -2.05
CCDC38-204ENST00000546816 SLC5A11Q8WWX8 675 aa2.22□□□□□ -2.05
CCDC38-204ENST00000546816 UPRTQ96BW1 309 aa2.22□□□□□ -2.05
CCDC38-204ENST00000546816 SDSLQ96GA7 329 aa2.22□□□□□ -2.05
CCDC38-204ENST00000546816 SPATA13Q96N96 652 aa2.22□□□□□ -2.05
CCDC38-204ENST00000546816 RSPO3Q9BXY4 272 aaPredicted RBP2.22□□□□□ -2.05
CCDC38-204ENST00000546816 SLC25A51Q9H1U9 297 aa2.22□□□□□ -2.05
CCDC38-204ENST00000546816 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.22□□□□□ -2.05
CCDC38-204ENST00000546816 KNSTRNQ9Y448 316 aa2.22□□□□□ -2.05
CCDC38-204ENST00000546816 RPGRIP1LQ68CZ1 1315 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 CASKO14936 926 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 STX11O75558 287 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 BCAS2O75934 225 aaPredicted RBP2.21□□□□□ -2.06
CCDC38-204ENST00000546816 CLUP10909 449 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 LHX2P50458 406 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 ATXN3P54252 364 aaPredicted RBP2.21□□□□□ -2.06
CCDC38-204ENST00000546816 APOC4P55056 127 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 FUT7Q11130 342 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 ARSKQ6UWY0 536 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 WDR88Q6ZMY6 472 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 ARMCX2Q7L311 632 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 LPCAT2Q7L5N7 544 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 ANKRD37Q7Z713 158 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 KDM8Q8N371 416 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 C15orf54Q8N8G6 183 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 OR5AU1Q8NGC0 362 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 OR56B1Q8NGI3 324 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 TRUB1Q8WWH5 349 aaKnown RBP2.21□□□□□ -2.06
CCDC38-204ENST00000546816 OR1E3Q8WZA6 343 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 CITED1Q99966 193 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 SPXQ9BT56 116 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 SRXN1Q9BYN0 137 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 SLC17A9Q9BYT1 436 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 THAP9Q9H5L6 903 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 GPN2Q9H9Y4 310 aaPredicted RBP2.21□□□□□ -2.06
CCDC38-204ENST00000546816 C1orf123Q9NWV4 160 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 RIMS3Q9UJD0 308 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 PLA2G4CQ9UP65 541 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 SLIT3O75094 1523 aa2.21□□□□□ -2.06
CCDC38-204ENST00000546816 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.2□□□□□ -2.06
CCDC38-204ENST00000546816 LOC100131303A0A0U1RQF7 123 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms