RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 ZCCHC4Q9H5U6 513 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 MVB12BQ9H7P6 319 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 SLC28A3Q9HAS3 691 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 ZFP64Q9NPA5 681 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 UCKL1Q9NWZ5 548 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 RNF186Q9NXI6 227 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 PTGFRNQ9P2B2 879 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 ZNF624Q9P2J8 865 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-225ENST00000545920 NLKQ9UBE8 527 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 TRPC4Q9UBN4 977 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 DPP7Q9UHL4 492 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 TEKT2Q9UIF3 430 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 ELF5Q9UKW6 265 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-225ENST00000545920 HEBP2Q9Y5Z4 205 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 TRAPPC13A5PLN9 417 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 LRIT2A6NDA9 550 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 ISM1B1AKI9 464 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 ALG1L2C9J202 215 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 FAM227AF5H4B4 570 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 M0R3H8 397 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 WWP2O00308 870 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 SAP18O00422 153 aaKnown RBP6.02□□□□□ -1.45
SNHG1-225ENST00000545920 KPNA3O00505 521 aaPredicted RBP6.02□□□□□ -1.45
SNHG1-225ENST00000545920 BET1O15155 118 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 CHP2O43745 196 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 TMPRSS11DO60235 418 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 GPRIN2O60269 458 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 B4GALT2O60909 372 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 SH3BGRLO75368 114 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 REM1O75628 298 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 SLC22A5O76082 557 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 WISP1O95388 367 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 IFNGP01579 166 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 GBAP04062 536 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 CHRM4P08173 479 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 CLEC2LP0C7M8 214 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 CISD3P0C7P0 127 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 SLC35G4P0C7Q5 338 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 C6P13671 934 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 CELP19835 753 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 POU3F2P20265 443 aaPredicted RBP6.02□□□□□ -1.45
SNHG1-225ENST00000545920 HIST1H1TP22492 207 aaPredicted RBP6.02□□□□□ -1.45
SNHG1-225ENST00000545920 NDUFS1P28331 727 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 PBLDP30039 288 aaPredicted RBP6.02□□□□□ -1.45
SNHG1-225ENST00000545920 MNDAP41218 407 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 RAB28P51157 221 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 PER3P56645 1201 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 NRG3P56975 720 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 SCAND1P57086 179 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 RGS8P57771 180 aaPredicted RBP6.02□□□□□ -1.45
SNHG1-225ENST00000545920 RPS7P62081 194 aaKnown RBP6.02□□□□□ -1.45
SNHG1-225ENST00000545920 ACTA2P62736 377 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 ACTG2P63267 376 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 CSNK1G2P78368 415 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 ILF3Q12906 894 aaKnown RBP eCLIP6.02□□□□□ -1.45
SNHG1-225ENST00000545920 DUSP8Q13202 625 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 TSTA3Q13630 321 aaPredicted RBP6.02□□□□□ -1.45
SNHG1-225ENST00000545920 GPR176Q14439 515 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 MAPK14Q16539 360 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 BTBD16Q32M84 506 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 HNRNPA1L2Q32P51 320 aaKnown RBP6.02□□□□□ -1.45
SNHG1-225ENST00000545920 CYP27C1Q4G0S4 372 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 FLYWCH1Q4VC44 716 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 CLLU1Q5K131 121 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 ELFN2Q5R3F8 820 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 LY6G5CQ5SRR4 150 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 ZNF57Q68EA5 555 aaPredicted RBP6.02□□□□□ -1.45
SNHG1-225ENST00000545920 SLC48A1Q6P1K1 146 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 SMARCD3Q6STE5 483 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 PAQR6Q6TCH4 344 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 PLEKHM3Q6ZWE6 761 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 BTN2A1Q7KYR7 527 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 OVCH1Q7RTY7 1134 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 C16orf62Q7Z3J2 963 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 UBE3DQ7Z6J8 389 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 PXKQ7Z7A4 578 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 C11orf96Q7Z7L8 435 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 ZNF547Q8IVP9 402 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 TRIM48Q8IWZ4 208 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 SYS1Q8N2H4 156 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 LNX2Q8N448 690 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 C9orf62Q8N4C0 152 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 LILRA3Q8N6C8 439 aaPredicted RBP6.02□□□□□ -1.45
SNHG1-225ENST00000545920 IQCF1Q8N6M8 205 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 ANKRD53Q8N9V6 530 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 NLGN4YQ8NFZ3 816 aaPredicted RBP6.02□□□□□ -1.45
SNHG1-225ENST00000545920 VN1R2Q8NFZ6 395 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 OR2L5Q8NG80 312 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 OR2L8Q8NGY9 312 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 OR56B4Q8NH76 319 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 OIT3Q8WWZ8 545 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 THRSPQ92748 146 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 RAB8BQ92930 207 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 TMEM203Q969S6 136 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 UPRTQ96BW1 309 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 ZSWIM3Q96MP5 696 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 MS4A4EQ96PG1 132 aa6.02□□□□□ -1.45
SNHG1-225ENST00000545920 CCNL2Q96S94 520 aaPredicted RBP6.02□□□□□ -1.45
SNHG1-225ENST00000545920 SECISBP2Q96T21 854 aaKnown RBP6.02□□□□□ -1.45
SNHG1-225ENST00000545920 THAP7Q9BT49 309 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms