RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 MAGEB4O15481 346 aaPredicted RBP14.68□□□□□ -0.06
LDLR-204ENST00000545707 P2RX6O15547 441 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 NDUFB5O43674 189 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 LDB3O75112 727 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 HTR2BP41595 481 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 RUNX2Q13950 521 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 BTBD16Q32M84 506 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 FIGNL1Q6PIW4 674 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 AMIGO1Q86WK6 493 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 C17orf47Q8NEP4 570 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 OR13C5Q8NGS8 318 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 OR13C2Q8NGS9 318 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 OR51A7Q8NH64 312 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 OR5W2Q8NH69 310 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 ZFAND1Q8TCF1 268 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 NR4A3Q92570 626 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 MS4A4EQ96PG1 132 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 COQ7Q99807 217 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 PLA2G2FQ9BZM2 168 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 MKRN2Q9H000 416 aaKnown RBP14.68□□□□□ -0.06
LDLR-204ENST00000545707 ENAMQ9NRM1 1142 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 TRAV27A0A087WT01 109 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 DUXAA6NLW8 204 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 IL9P15248 144 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 HCCSP53701 268 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 EEF1A1P68104 462 aaKnown RBP14.67□□□□□ -0.06
LDLR-204ENST00000545707 RUNX3Q13761 415 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 OR1Q1Q15612 314 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 CCDC58Q4VC31 144 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 MRPL2Q5T653 305 aaKnown RBP14.67□□□□□ -0.06
LDLR-204ENST00000545707 FBXO42Q6P3S6 717 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 SYT9Q86SS6 491 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 SLC37A3Q8NCC5 494 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 DEDD2Q8WXF8 326 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 KISS1RQ969F8 398 aaPredicted RBP14.67□□□□□ -0.06
LDLR-204ENST00000545707 C1QTNF2Q9BXJ5 285 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 SLC17A9Q9BYT1 436 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 RSPH9Q9H1X1 276 aaPredicted RBP14.67□□□□□ -0.06
LDLR-204ENST00000545707 CERS4Q9HA82 394 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 KCMF1Q9P0J7 381 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 DPP7Q9UHL4 492 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 KLHL21Q9UJP4 597 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 SLC17A4Q9Y2C5 497 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 J3QLW9 94 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 BHLHE40O14503 412 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 ZNF780AO75290 641 aaPredicted RBP14.67□□□□□ -0.06
LDLR-204ENST00000545707 ALX3O95076 343 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 ZNF19P17023 458 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 ERP29P30040 261 aaKnown RBP14.67□□□□□ -0.06
LDLR-204ENST00000545707 RRAS2P62070 204 aaPredicted RBP14.67□□□□□ -0.06
LDLR-204ENST00000545707 PRPF38BQ5VTL8 546 aaKnown RBP14.67□□□□□ -0.06
LDLR-204ENST00000545707 PRSS41Q7RTY9 318 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 GPR135Q8IZ08 494 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 OR4K14Q8NGD5 310 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 SP7Q8TDD2 431 aaPredicted RBP14.67□□□□□ -0.06
LDLR-204ENST00000545707 TMEM239Q8WW34 195 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 SNAPC3Q92966 411 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 HS6ST2Q96MM7 605 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 CD180Q99467 661 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 THAP7Q9BT49 309 aaPredicted RBP14.67□□□□□ -0.06
LDLR-204ENST00000545707 IFT27Q9BW83 186 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 SLC28A3Q9HAS3 691 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 KLHL1Q9NR64 748 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 CLDND1Q9NY35 253 aa14.67□□□□□ -0.06
LDLR-204ENST00000545707 USP36Q9P275 1121 aaKnown RBP14.67□□□□□ -0.06
LDLR-204ENST00000545707 ZNF223Q9UK11 482 aaPredicted RBP14.67□□□□□ -0.06
LDLR-204ENST00000545707 A0A0B4J203 849 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 POM121BA6NF01 834 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 LRRC72A6NJI9 287 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 EEF1E1O43324 174 aaKnown RBP14.66□□□□□ -0.06
LDLR-204ENST00000545707 ORC5O43913 435 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 CTSVO60911 334 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 OR12D2P58182 307 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 TMEM44Q2T9K0 475 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 SLC25A35Q3KQZ1 300 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 ARHGAP11BQ3KRB8 267 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 LAMTOR1Q6IAA8 161 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 ZC3H14Q6PJT7 736 aaKnown RBP14.66□□□□□ -0.06
LDLR-204ENST00000545707 KRT74Q7RTS7 529 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 CEACAM19Q7Z692 300 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 ASPGQ86U10 573 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 PAQR7Q86WK9 346 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 GRHL3Q8TE85 626 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 APOOQ9BUR5 198 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 LYARQ9NX58 379 aaKnown RBP14.66□□□□□ -0.06
LDLR-204ENST00000545707 MRPS2Q9Y399 296 aaKnown RBP14.66□□□□□ -0.06
LDLR-204ENST00000545707 HSPB11Q9Y547 144 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 TRAV6A0A075B6T7 132 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 TBC1D3DA0A087WVF3 549 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 TBC1D3IA0A087WXS9 549 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 TBC1D3EA0A087X179 549 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 TBC1D3KA0A087X1G2 549 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 TRAPPC13A5PLN9 417 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 TBC1D3FA6NER0 549 aaPredicted RBP14.66□□□□□ -0.06
LDLR-204ENST00000545707 PRR19A6NJB7 356 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 NOTOA8MTQ0 251 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 GPR89AB7ZAQ6 455 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 TBC1D3LB9A6J9 549 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 H0Y8X5 98 aa14.66□□□□□ -0.06
LDLR-204ENST00000545707 SGK494L7N484 410 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms