RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 MISPQ8IVT2 679 aa12.99□□□□□ -0.33
RTN3-214ENST00000545432 SLC9A6Q92581 669 aa12.99□□□□□ -0.33
RTN3-214ENST00000545432 ZNF75CPQ92670 426 aaPredicted RBP12.99□□□□□ -0.33
RTN3-214ENST00000545432 MUCL1Q96DR8 90 aa12.99□□□□□ -0.33
RTN3-214ENST00000545432 AMDHD1Q96NU7 426 aa12.99□□□□□ -0.33
RTN3-214ENST00000545432 PSD2Q9BQI7 771 aa12.99□□□□□ -0.33
RTN3-214ENST00000545432 PRR14Q9BWN1 585 aa12.99□□□□□ -0.33
RTN3-214ENST00000545432 COQ10BQ9H8M1 238 aa12.99□□□□□ -0.33
RTN3-214ENST00000545432 SENP1Q9P0U3 644 aa12.99□□□□□ -0.33
RTN3-214ENST00000545432 NTMQ9P121 344 aa12.99□□□□□ -0.33
RTN3-214ENST00000545432 WBP11Q9Y2W2 641 aaKnown RBP12.99□□□□□ -0.33
RTN3-214ENST00000545432 GNG14A0A1W2PPG7 69 aa12.98□□□□□ -0.33
RTN3-214ENST00000545432 NDUFS8O00217 210 aa12.98□□□□□ -0.33
RTN3-214ENST00000545432 SMIM24O75264 130 aa12.98□□□□□ -0.33
RTN3-214ENST00000545432 LYZL6O75951 148 aa12.98□□□□□ -0.33
RTN3-214ENST00000545432 JUNP05412 331 aaKnown RBP12.98□□□□□ -0.33
RTN3-214ENST00000545432 COL6A2P12110 1019 aa12.98□□□□□ -0.33
RTN3-214ENST00000545432 IGHV1-2P23083 117 aa12.98□□□□□ -0.33
RTN3-214ENST00000545432 PTAFRP25105 342 aa12.98□□□□□ -0.33
RTN3-214ENST00000545432 SERPINB8P50452 374 aa12.98□□□□□ -0.33
RTN3-214ENST00000545432 RAC3P60763 192 aa12.98□□□□□ -0.33
RTN3-214ENST00000545432 TRADDQ15628 312 aa12.98□□□□□ -0.33
RTN3-214ENST00000545432 ARL13AQ5H913 290 aaPredicted RBP12.98□□□□□ -0.33
RTN3-214ENST00000545432 TCHHL1Q5QJ38 904 aaPredicted RBP12.98□□□□□ -0.33
RTN3-214ENST00000545432 TMEM108Q6UXF1 575 aa12.98□□□□□ -0.33
RTN3-214ENST00000545432 ZNF433Q8N7K0 673 aaPredicted RBP12.98□□□□□ -0.33
RTN3-214ENST00000545432 REXO5Q96IC2 774 aaKnown RBP12.98□□□□□ -0.33
RTN3-214ENST00000545432 TMEM185BQ9H7F4 350 aa12.98□□□□□ -0.33
RTN3-214ENST00000545432 CXorf36Q9H7Y0 433 aa12.98□□□□□ -0.33
RTN3-214ENST00000545432 DDX18Q9NVP1 670 aaKnown RBP12.98□□□□□ -0.33
RTN3-214ENST00000545432 RNF14Q9UBS8 474 aa12.98□□□□□ -0.33
RTN3-214ENST00000545432 PRSS50Q9UI38 385 aa12.98□□□□□ -0.33
RTN3-214ENST00000545432 ACTL7BQ9Y614 415 aa12.98□□□□□ -0.33
RTN3-214ENST00000545432 LOC100289279A0A1B0GTE1 492 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 ZNF724A8MTY0 619 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 ETV2O00321 342 aaPredicted RBP12.97□□□□□ -0.33
RTN3-214ENST00000545432 ZNF195O14628 629 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 GMFGO60234 142 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 ULK1O75385 1050 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 ANXA4P09525 319 aaPredicted RBP12.97□□□□□ -0.33
RTN3-214ENST00000545432 TSPAN8P19075 237 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 ENPP1P22413 925 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 EDNRAP25101 427 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 CD40P25942 277 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 CFPP27918 469 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 ZNF41P51814 821 aaPredicted RBP12.97□□□□□ -0.33
RTN3-214ENST00000545432 MRPS25P82663 173 aaKnown RBP12.97□□□□□ -0.33
RTN3-214ENST00000545432 CLCQ05315 142 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 ACSM2AQ08AH3 577 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 RASA2Q15283 850 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 TSNAXIP1Q2TAA8 658 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 ACSM2BQ68CK6 577 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 B3GLCTQ6Y288 498 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 FBXL14Q8N1E6 418 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 DEPDC4Q8N2C3 294 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 PIK3R3Q92569 461 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 HTRA1Q92743 480 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 ZNF382Q96SR6 550 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 MRPL57Q9BQC6 102 aaKnown RBP12.97□□□□□ -0.33
RTN3-214ENST00000545432 ADAM19Q9H013 955 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 VPS11Q9H270 941 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 DPH5Q9H2P9 285 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 SLC25A15Q9Y619 301 aa12.97□□□□□ -0.33
RTN3-214ENST00000545432 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 GJE1A6NN92 205 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 A8MT66 165 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 KIF2AO00139 706 aaPredicted RBP12.96□□□□□ -0.33
RTN3-214ENST00000545432 KCNK2O95069 426 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 DHRS4L1P0CG22 281 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 PRPS2P11908 318 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 GGT1P19440 569 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 HNF1AP20823 631 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 NR4A2P43354 598 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 HTR6P50406 440 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 CAV1Q03135 178 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 C2orf80Q0P641 193 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 CD226Q15762 336 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 SWI5Q1ZZU3 235 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 MST1LQ2TV78 715 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 UNC50Q53HI1 259 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 SLC25A53Q5H9E4 307 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 ZDHHC24Q6UX98 284 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 IL17RELQ6ZVW7 336 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 ZAR1Q86SH2 424 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 CDYL2Q8N8U2 506 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 OR6Y1Q8NGX8 325 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 B4GALNT2Q8NHY0 566 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 FBXO25Q8TCJ0 367 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 GIMAP5Q96F15 307 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 ZNF764Q96H86 408 aaPredicted RBP12.96□□□□□ -0.33
RTN3-214ENST00000545432 FUT8Q9BYC5 575 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 UBQLN4Q9NRR5 601 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 KLHL9Q9P2J3 617 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 ICAM5Q9UMF0 924 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 SAR1BQ9Y6B6 198 aa12.96□□□□□ -0.33
RTN3-214ENST00000545432 ARFGEF3Q5TH69 2177 aa12.96□□□□□ -0.34
RTN3-214ENST00000545432 SMAD9O15198 467 aaKnown RBP12.95□□□□□ -0.34
RTN3-214ENST00000545432 ZSCAN12O43309 604 aa12.95□□□□□ -0.34
RTN3-214ENST00000545432 TCF21O43680 179 aa12.95□□□□□ -0.34
RTN3-214ENST00000545432 CYTIPO60759 359 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms