RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 RNF128Q8TEB7 428 aa12.61□□□□□ -0.39
DDX11-228ENST00000545115 OSTF1Q92882 214 aa12.61□□□□□ -0.39
DDX11-228ENST00000545115 OTUB1Q96FW1 271 aaPredicted RBP12.61□□□□□ -0.39
DDX11-228ENST00000545115 CHMP6Q96FZ7 201 aa12.61□□□□□ -0.39
DDX11-228ENST00000545115 PLPPR2Q96GM1 343 aa12.61□□□□□ -0.39
DDX11-228ENST00000545115 REXO5Q96IC2 774 aaKnown RBP12.61□□□□□ -0.39
DDX11-228ENST00000545115 STACQ99469 402 aa12.61□□□□□ -0.39
DDX11-228ENST00000545115 GATA5Q9BWX5 397 aaPredicted RBP12.61□□□□□ -0.39
DDX11-228ENST00000545115 BTBD2Q9BX70 525 aa12.61□□□□□ -0.39
DDX11-228ENST00000545115 C12orf49Q9H741 205 aa12.61□□□□□ -0.39
DDX11-228ENST00000545115 SIRT3Q9NTG7 399 aaPredicted RBP12.61□□□□□ -0.39
DDX11-228ENST00000545115 ZCCHC3Q9NUD5 404 aaKnown RBP12.61□□□□□ -0.39
DDX11-228ENST00000545115 GIN1Q9NXP7 522 aa12.61□□□□□ -0.39
DDX11-228ENST00000545115 TMEM114B3SHH9 223 aa12.6□□□□□ -0.39
DDX11-228ENST00000545115 HS3ST1O14792 307 aa12.6□□□□□ -0.39
DDX11-228ENST00000545115 SCAMP2O15127 329 aaKnown RBP12.6□□□□□ -0.39
DDX11-228ENST00000545115 PLAUP00749 431 aa12.6□□□□□ -0.39
DDX11-228ENST00000545115 HMGN2P05204 90 aaKnown RBP12.6□□□□□ -0.39
DDX11-228ENST00000545115 EFNA1P20827 205 aaPredicted RBP12.6□□□□□ -0.39
DDX11-228ENST00000545115 ATP6V1C1P21283 382 aa12.6□□□□□ -0.39
DDX11-228ENST00000545115 PCSK6P29122 969 aa12.6□□□□□ -0.39
DDX11-228ENST00000545115 SFTPDP35247 375 aa12.6□□□□□ -0.39
DDX11-228ENST00000545115 HPCAL1P37235 193 aa12.6□□□□□ -0.39
DDX11-228ENST00000545115 RPL3P39023 403 aaKnown RBP12.6□□□□□ -0.39
DDX11-228ENST00000545115 CARD18P57730 90 aa12.6□□□□□ -0.39
DDX11-228ENST00000545115 ZNF117Q03924 483 aa12.6□□□□□ -0.39
DDX11-228ENST00000545115 FOXF1Q12946 379 aa12.6□□□□□ -0.39
DDX11-228ENST00000545115 LASP1Q14847 261 aaKnown RBP12.6□□□□□ -0.39
DDX11-228ENST00000545115 RNPS1Q15287 305 aaKnown RBP12.6□□□□□ -0.39
DDX11-228ENST00000545115 ZNF239Q16600 458 aaKnown RBP12.6□□□□□ -0.39
DDX11-228ENST00000545115 DDIASQ8IXT1 998 aa12.6□□□□□ -0.39
DDX11-228ENST00000545115 ZNF611Q8N823 705 aa12.6□□□□□ -0.39
DDX11-228ENST00000545115 EIF1ADQ8N9N8 165 aaKnown RBP12.6□□□□□ -0.39
DDX11-228ENST00000545115 ZNF527Q8NB42 609 aa12.6□□□□□ -0.39
DDX11-228ENST00000545115 PHOSPHO1Q8TCT1 267 aa12.6□□□□□ -0.39
DDX11-228ENST00000545115 EPS8L3Q8TE67 593 aaKnown RBP12.6□□□□□ -0.39
DDX11-228ENST00000545115 TWIST2Q8WVJ9 160 aa12.6□□□□□ -0.39
DDX11-228ENST00000545115 CPNE4Q96A23 557 aaPredicted RBP12.6□□□□□ -0.39
DDX11-228ENST00000545115 KLHDC3Q9BQ90 382 aa12.6□□□□□ -0.39
DDX11-228ENST00000545115 TMEM204Q9BSN7 226 aa12.6□□□□□ -0.39
DDX11-228ENST00000545115 PIGUQ9H490 435 aa12.6□□□□□ -0.39
DDX11-228ENST00000545115 TIGARQ9NQ88 270 aa12.6□□□□□ -0.39
DDX11-228ENST00000545115 ZNF701Q9NV72 531 aaPredicted RBP12.6□□□□□ -0.39
DDX11-228ENST00000545115 ATP6V1HQ9UI12 483 aa12.6□□□□□ -0.39
DDX11-228ENST00000545115 DNHD1Q96M86 4753 aa12.6□□□□□ -0.39
DDX11-228ENST00000545115 ROS1P08922 2347 aa12.6□□□□□ -0.39
DDX11-228ENST00000545115 GJE1A6NN92 205 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 NUDT14O95848 222 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 BCKDHAP12694 445 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 NID1P14543 1247 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 ADH6P28332 368 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 MAPK1P28482 360 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 SHC1P29353 583 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 P2RX1P51575 399 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 SUMO3P55854 103 aaPredicted RBP12.59□□□□□ -0.39
DDX11-228ENST00000545115 PPP2R2BQ00005 443 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 ZNF844Q08AG5 666 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 TMEM201Q5SNT2 666 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 CDC73Q6P1J9 531 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 TFAP2EQ6VUC0 442 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 STEAP2Q8NFT2 490 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 ABHD3Q8WU67 409 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 ROBO4Q8WZ75 1007 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 CDS1Q92903 461 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 TACO1Q9BSH4 297 aaKnown RBP12.59□□□□□ -0.39
DDX11-228ENST00000545115 HDHD5Q9BXW7 423 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 HOXD1Q9GZZ0 328 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 GP6Q9HCN6 339 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 KLHL13Q9P2N7 655 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 SNX8Q9Y5X2 465 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 HIVEP2P31629 2446 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 HEATR5AQ86XA9 2040 aa12.59□□□□□ -0.39
DDX11-228ENST00000545115 TMEM233B4DJY2 109 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 H3BNH8 94 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 PIP5K1BO14986 540 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 GCM2O75603 506 aaPredicted RBP12.58□□□□□ -0.4
DDX11-228ENST00000545115 CHRNGP07510 517 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 FGF4P08620 206 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 KRT16P08779 473 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 ATP5J2P56134 94 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 TP53BP2Q13625 1128 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 UGT3A2Q3SY77 523 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 KLHL26Q53HC5 615 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 DCST2Q5T1A1 773 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 CBLN3Q6UW01 205 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 FCRLAQ7L513 359 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 PRIMA1Q86XR5 153 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 TUSC5Q8IXB3 177 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 GABRG1Q8N1C3 465 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 OR7A2PQ8NGA2 310 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 OR56A1Q8NGH5 318 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 FBXO27Q8NI29 283 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 ADAMTS15Q8TE58 950 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 AKAP1Q92667 903 aaKnown RBP eCLIP12.58□□□□□ -0.4
DDX11-228ENST00000545115 S100PBPQ96BU1 408 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 PPP3R2Q96LZ3 170 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 ACTRT3Q9BYD9 372 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 SRXN1Q9BYN0 137 aa12.58□□□□□ -0.4
DDX11-228ENST00000545115 EML4Q9HC35 981 aaKnown RBP12.58□□□□□ -0.4
DDX11-228ENST00000545115 ATAD3AQ9NVI7 634 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms