RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 TCN1P20061 433 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 MSX1P28360 303 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ADH7P40394 386 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 PCBP3P57721 371 aaKnown RBP13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ZNF117Q03924 483 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 MRPL2Q5T653 305 aaKnown RBP13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ZNF836Q6ZNA1 936 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ARMC8Q8IUR7 673 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 CMIPQ8IY22 773 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 OR2M3Q8NG83 312 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 NR4A3Q92570 626 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 LDAHQ9H6V9 325 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 QPCTLQ9NXS2 382 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 TAS2R1Q9NYW7 299 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 HRH3Q9Y5N1 445 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 PCNX3Q9H6A9 2034 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 FREM3P0C091 2139 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 IGLV3-32A0A0A0MS00 114 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 EIF4E2O60573 245 aaKnown RBP13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 GMNNO75496 209 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ATP5HO75947 161 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 C1QL1O75973 258 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 OPN1SWP03999 348 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 MST1P26927 711 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 DPP4P27487 766 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 PGM1P36871 562 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 RASSF2P50749 326 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 P2RX1P51575 399 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 DSCR4P56555 118 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 SLC10A1Q14973 349 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 LRRC23Q53EV4 343 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 CBLN3Q6UW01 205 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 FADS6Q8N9I5 356 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 SMYD1Q8NB12 490 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 FAM156AQ8NDB6 213 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 FIG4Q92562 907 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 LAT2Q9GZY6 243 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 UBQLN3Q9H347 655 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 EXO5Q9H790 373 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ZDHHC11Q9H8X9 412 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 RLIMQ9NVW2 624 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 SLC13A4Q9UKG4 626 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 B4DXG7 233 aa13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 FAM47E-STBD1D6RA91 191 aa13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 OIP5O43482 229 aa13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 MFN2O95140 757 aa13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 CELA3AP09093 270 aa13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 TCEA1P23193 301 aaKnown RBP13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 SRD5A2P31213 254 aa13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 PRKAR1BP31321 381 aa13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ZNF41P51814 821 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 EEF1A1P68104 462 aaKnown RBP13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 GABPB1Q06547 395 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 SKP2Q13309 424 aa13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 GANABQ14697 944 aaKnown RBP13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 DNAL1Q4LDG9 190 aa13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 EIPR1Q53HC9 387 aa13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 RNF220Q5VTB9 566 aa13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ZNF324BQ6AW86 544 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 CCDC121Q6ZUS5 278 aa13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 CCDC80Q76M96 950 aa13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 FAM83FQ8NEG4 500 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 BHLHE22Q8NFJ8 381 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 TOR1AIP2Q8NFQ8 470 aa13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 OR14L1PQ8NHC6 308 aa13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 CNOT9Q92600 299 aaKnown RBP13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 BTBD10Q9BSF8 475 aa13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 EGFL7Q9UHF1 273 aa13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ICAM5Q9UMF0 924 aa13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 PRPF19Q9UMS4 504 aaKnown RBP13.17□□□□□ -0.3
TNFRSF1A-216ENST00000543995 CDHR4A6H8M9 788 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ANKUB1A6NFN9 424 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 CXCR6O00574 342 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 BCAS1O75363 584 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 GCM2O75603 506 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 IFNA14P01570 189 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 HPNP05981 417 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 HSD17B1P14061 328 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 HK1P19367 917 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 HTR1EP28566 365 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 KDELR2P33947 212 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 DMTNQ08495 405 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 CBFBQ13951 182 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ZSWIM7Q19AV6 140 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 SPATS1Q496A3 300 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 CMPK2Q5EBM0 449 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ARSKQ6UWY0 536 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 YRDCQ86U90 279 aaKnown RBP13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 SIAH3Q8IW03 269 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ARHGAP24Q8N264 748 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 CLIP4Q8N3C7 705 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 OR5W2Q8NH69 310 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 RASSF5Q8WWW0 418 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 FAM162AQ96A26 154 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 SLC7A6OSQ96CW6 309 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ARSGQ96EG1 525 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 C1GALT1C1Q96EU7 318 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 GPR137Q96N19 417 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 SLX1AQ9BQ83 275 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 THTPAQ9BU02 230 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms