RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 FAM171A2A8MVW0 826 aa18.19■□□□□ 0.5
SUDS3-204ENST00000543473 GYPBP06028 91 aa18.19■□□□□ 0.5
SUDS3-204ENST00000543473 H2BFMP0C1H6 154 aa18.19■□□□□ 0.5
SUDS3-204ENST00000543473 PTGER1P34995 402 aa18.19■□□□□ 0.5
SUDS3-204ENST00000543473 PSMB10P40306 273 aa18.19■□□□□ 0.5
SUDS3-204ENST00000543473 SUOXP51687 545 aa18.19■□□□□ 0.5
SUDS3-204ENST00000543473 RPL19P84098 196 aaKnown RBP18.19■□□□□ 0.5
SUDS3-204ENST00000543473 TSPAN31Q12999 210 aa18.19■□□□□ 0.5
SUDS3-204ENST00000543473 FGL2Q14314 439 aa18.19■□□□□ 0.5
SUDS3-204ENST00000543473 CHRFAM7AQ494W8 412 aa18.19■□□□□ 0.5
SUDS3-204ENST00000543473 UBTD2Q8WUN7 234 aa18.19■□□□□ 0.5
SUDS3-204ENST00000543473 MEPEQ9NQ76 525 aaPredicted RBP18.19■□□□□ 0.5
SUDS3-204ENST00000543473 MAFFQ9ULX9 164 aa18.19■□□□□ 0.5
SUDS3-204ENST00000543473 H7C417 338 aa18.19■□□□□ 0.5
SUDS3-204ENST00000543473 DCNP07585 359 aaKnown RBP18.19■□□□□ 0.5
SUDS3-204ENST00000543473 C6P13671 934 aa18.19■□□□□ 0.5
SUDS3-204ENST00000543473 RAB28P51157 221 aa18.19■□□□□ 0.5
SUDS3-204ENST00000543473 TCTE1Q5JU00 501 aa18.19■□□□□ 0.5
SUDS3-204ENST00000543473 LRIF1Q5T3J3 769 aa18.19■□□□□ 0.5
SUDS3-204ENST00000543473 FAM46BQ96A09 425 aa18.19■□□□□ 0.5
SUDS3-204ENST00000543473 OR8D2Q9GZM6 311 aa18.19■□□□□ 0.5
SUDS3-204ENST00000543473 RIDAP52758 137 aaKnown RBP18.18■□□□□ 0.5
SUDS3-204ENST00000543473 OR7G2Q8NG99 324 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 PLCXD1Q9NUJ7 323 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 USP36Q9P275 1121 aaKnown RBP18.18■□□□□ 0.5
SUDS3-204ENST00000543473 H0YIV9 168 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 HCRTR2O43614 444 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 AKAIN1P0CW23 69 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 CYCSP99999 105 aaKnown RBP18.18■□□□□ 0.5
SUDS3-204ENST00000543473 PRRT3Q5FWE3 981 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 SLC9B2Q86UD5 537 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 ZFAND1Q8TCF1 268 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 TM9SF4Q92544 642 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 INPP5EQ9NRR6 644 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 GPR89AB7ZAQ6 455 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 ADAM12O43184 909 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 ERCC1P07992 297 aaPredicted RBP18.18■□□□□ 0.5
SUDS3-204ENST00000543473 GPR89BP0CG08 455 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 SNRPBP14678 240 aaKnown RBP18.18■□□□□ 0.5
SUDS3-204ENST00000543473 NFYAP23511 347 aaPredicted RBP18.18■□□□□ 0.5
SUDS3-204ENST00000543473 PXDC1Q5TGL8 231 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 TMEM150AQ86TG1 271 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 ARL14Q8N4G2 192 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 TCTEX1D2Q8WW35 142 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 RBPMSQ93062 196 aaKnown RBP18.18■□□□□ 0.5
SUDS3-204ENST00000543473 CLSTN3Q9BQT9 956 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 ZNF385DQ9H6B1 395 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 EMC7Q9NPA0 242 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 SDHAF3Q9NRP4 125 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 SLC25A37Q9NYZ2 338 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 TAPBPO15533 448 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 GPX5O75715 221 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 TGM6O95932 706 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 CTSCP53634 463 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 COX20Q5RI15 118 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 SLC29A4Q7RTT9 530 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 ZNF546Q86UE3 836 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 OR9A2Q8NGT5 310 aa18.18■□□□□ 0.5
SUDS3-204ENST00000543473 URM1Q9BTM9 101 aaKnown RBP18.18■□□□□ 0.5
SUDS3-204ENST00000543473 ZNF701Q9NV72 531 aaPredicted RBP18.18■□□□□ 0.5
SUDS3-204ENST00000543473 N4BP2Q86UW6 1770 aaPredicted RBP18.18■□□□□ 0.5
SUDS3-204ENST00000543473 AMY2BP19961 511 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 SLX4IPQ5VYV7 408 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 SDR9C7Q8NEX9 313 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 OR52I1Q8NGK6 324 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 DCUN1D4Q92564 292 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 TCEAL3Q969E4 200 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 CDC123O75794 336 aaPredicted RBP18.17■□□□□ 0.5
SUDS3-204ENST00000543473 HLA-DMAP28067 261 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 SHC1P29353 583 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 SGSHP51688 502 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 HERV-K104P61576 105 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 OR5T2Q8NGG2 359 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 ZNF417Q8TAU3 575 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 SLC25A46Q96AG3 418 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 MS4A4EQ96PG1 132 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 HIST1H2AAQ96QV6 131 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 ALOXE3Q9BYJ1 711 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 MVB12BQ9H7P6 319 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 HCFC1R1Q9NWW0 138 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 TMPRSS11EQ9UL52 423 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 IER3IP1Q9Y5U9 82 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 MEIS3P1A6NDR6 274 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 IL1RNP18510 177 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 GDNFP39905 211 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 COL9A2Q14055 689 aaPredicted RBP18.17■□□□□ 0.5
SUDS3-204ENST00000543473 OR6V1Q8N148 313 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 C12orf45Q8N5I9 185 aaPredicted RBP18.17■□□□□ 0.5
SUDS3-204ENST00000543473 PLA2G15Q8NCC3 412 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 BPIFA2Q96DR5 249 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 ZNF649Q9BS31 505 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 ASIC5Q9NY37 505 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.17■□□□□ 0.5
SUDS3-204ENST00000543473 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.17■□□□□ 0.5
SUDS3-204ENST00000543473 HSPA12AO43301 675 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 SSX5O60225 188 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 ENDOUP21128 410 aaKnown RBP18.17■□□□□ 0.5
SUDS3-204ENST00000543473 CTXN1P60606 82 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 EOGTQ5NDL2 527 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 LCTLQ6UWM7 567 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms