RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, human

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNFRSF1A-215	ENST00000543359	OGFOD2	Q6N063	350 aa		11.77	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	CDC20B	Q86Y33	519 aa		11.77	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	CHDH	Q8NE62	594 aa	Predicted RBP	11.77	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	OR5D16	Q8NGK9	328 aa		11.77	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	B4GALNT2	Q8NHY0	566 aa		11.77	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	MIPOL1	Q8TD10	442 aa		11.77	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	TESC	Q96BS2	214 aa		11.77	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	TLCD1	Q96CP7	247 aa		11.77	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	TEX37	Q96LM6	180 aa		11.77	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	RNF145	Q96MT1	663 aa		11.77	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	SDF2	Q99470	211 aa		11.77	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	POLDIP3	Q9BY77	421 aa	Known RBP	11.77	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	HOXD1	Q9GZZ0	328 aa		11.77	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	KCNE5	Q9UJ90	142 aa		11.77	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ICAM5	Q9UMF0	924 aa		11.77	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	FAF1	Q9UNN5	650 aa	Predicted RBP	11.77	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	C2CD3	Q4AC94	2353 aa		11.77	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	PRR14L	Q5THK1	2151 aa		11.77	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359		A0A0J9YW62	118 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	PRSS51	A0A1B0GVH4	220 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359		A0A1W2PPR1	153 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	TMEM120B	A0PK00	339 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	CFLAR	O15519	480 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	FCMR	O60667	390 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	NTN1	O95631	604 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	C1QC	P02747	245 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	OPN1LW	P04000	364 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	KRT16	P08779	473 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	LBP	P18428	481 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	SHC1	P29353	583 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	IST1	P53990	364 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	RAC1	P63000	192 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	FAM27E3	Q08E93	113 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	CASP8	Q14790	479 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	TOMM34	Q15785	309 aa	Predicted RBP	11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	HEPHL1	Q6MZM0	1159 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	CHMP1B	Q7LBR1	199 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	OLIG3	Q7RTU3	272 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	P4HA3	Q7Z4N8	544 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	MTERF4	Q7Z6M4	381 aa	Known RBP	11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	WDR75	Q8IWA0	830 aa	Known RBP	11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	CNEP1R1	Q8N9A8	125 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	OR10D3	Q8NH80	312 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	PHOSPHO1	Q8TCT1	267 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	GPR119	Q8TDV5	335 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	SMPDL3B	Q92485	455 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	CHMP6	Q96FZ7	201 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	DACH2	Q96NX9	599 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	DPY30	Q9C005	99 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	NMUR2	Q9GZQ4	415 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ST6GALNAC2	Q9UJ37	374 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	DTNA	Q9Y4J8	743 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ZAN	Q9Y493	2812 aa		11.76	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	CENPVL1	A0A0U1RR11	272 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	PRAMEF27	A3QJZ7	478 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ETV2	O00321	342 aa	Predicted RBP	11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	EIF1AY	O14602	144 aa	Known RBP	11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	DNAJA2	O60884	412 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	HRG	P04196	525 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	CD8B	P10966	210 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	HPGD	P15428	266 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	MATN1	P21941	496 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	IL12A	P29459	219 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	CCKAR	P32238	428 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	EIF1AX	P47813	144 aa	Known RBP	11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	RPS3A	P61247	264 aa	Known RBP	11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	NDUFAF6	Q330K2	333 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ARHGAP11B	Q3KRB8	267 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	SPANXN4	Q5MJ08	99 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	HHAT	Q5VTY9	493 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	BHLHB9	Q6PI77	547 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	C22orf34	Q6ZV56	151 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ANKRD46	Q86W74	232 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	KIRREL3	Q8IZU9	778 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ANKRD42	Q8N9B4	389 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	NINJ1	Q92982	152 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	PAIP2	Q9BPZ3	127 aa	Known RBP	11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	OPN3	Q9H1Y3	402 aa	Predicted RBP	11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	CXXC4	Q9H2H0	198 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	PLEKHF2	Q9H8W4	249 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	THAP1	Q9NVV9	213 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	CARD8	Q9Y2G2	431 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	TESMIN	Q9Y4I5	508 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	GPR45	Q9Y5Y3	372 aa		11.75	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	FREM1	Q5H8C1	2179 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	RNF103-CHMP3	A0A140T963	221 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ZNF195	O14628	629 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	SIAH2	O43255	324 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	GUSB	P08236	651 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ATP6V1C1	P21283	382 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	UQCRC2	P22695	453 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ADH6	P28332	368 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	CD79B	P40259	229 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	EIF1	P41567	113 aa	Known RBP	11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	CPA2	P48052	419 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	P2RX1	P51575	399 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ZNF41	P51814	821 aa	Predicted RBP	11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ART1	P52961	327 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	CASP9	P55211	416 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	MAGOH	P61326	146 aa	Known RBP	11.74	□□□□□ -0.53

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