RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 SF3A2Q15428 464 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 LTB4RQ15722 352 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 ZNF791Q3KP31 576 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 Q5BKY6 102 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 FHL5Q5TD97 284 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 TRIQKQ629K1 86 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 MZT2BQ6NZ67 158 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 NIPAL3Q6P499 406 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 MZT2AQ6P582 158 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 FAM111BQ6SJ93 734 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SMARCD3Q6STE5 483 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 ZNF836Q6ZNA1 936 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 RRM2BQ7LG56 351 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 C16orf62Q7Z3J2 963 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SPRED2Q7Z698 418 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 NR2C2APQ86WQ0 139 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 CPOQ8IVL8 374 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 GID4Q8IVV7 300 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SAMD14Q8IZD0 417 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 RNF113BQ8IZP6 322 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 HDDC3Q8N4P3 179 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SIRT6Q8N6T7 355 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 TMEM145Q8NBT3 493 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SLC16A11Q8NCK7 471 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 NLGN4YQ8NFZ3 816 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 OR2T33Q8NG76 320 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 OR7G2Q8NG99 324 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 FLVCR1-AS1Q8TAF5 88 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 NEIL3Q8TAT5 605 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 ENKURQ8TC29 256 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 ADAMTS15Q8TE58 950 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 TMEM255BQ8WV15 326 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 KAT2AQ92830 837 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 FGF13Q92913 245 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 GAL3ST3Q96A11 431 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 TM4SF19Q96DZ7 209 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 AHCYL2Q96HN2 611 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SAMD8Q96LT4 415 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 FYTTD1Q96QD9 318 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 TMEM246Q9BRR3 403 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 TTYH2Q9BSA4 534 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 TMED9Q9BVK6 235 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 TRMT61BQ9BVS5 477 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 HDHD5Q9BXW7 423 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 OSGEPL1Q9H4B0 414 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 RERGLQ9H628 205 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 C6orf106Q9H6K1 298 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 NIPAL2Q9H841 368 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 ZDHHC4Q9NPG8 344 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 ACOXLQ9NUZ1 547 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 PAQR5Q9NXK6 330 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 COMMD3Q9UBI1 195 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 TNFRSF10DQ9UBN6 386 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 STON1Q9Y6Q2 735 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 ZNF780BQ9Y6R6 833 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 MAU2Q9Y6X3 613 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 COL4A2P08572 1712 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 TRAPPC13A5PLN9 417 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 UNC119BA6NIH7 251 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 A6NL46 340 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 ISM1B1AKI9 464 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 DVL2O14641 736 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 KHNYNO15037 678 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 LYRM1O43325 122 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 RNF13O43567 381 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 FMO6PO60774 539 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 RGS9O75916 674 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 NCR1O76036 304 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 KAT7O95251 611 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 CH25HO95992 272 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 PAK4O96013 591 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 IFI6P09912 130 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 PRKAR1AP10644 381 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 HK1P19367 917 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 LORP23490 312 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 HTR2AP28223 471 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 ERP29P30040 261 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 THBS2P35442 1172 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 IGFALSP35858 605 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 MAP3K8P41279 467 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 RFX3P48380 749 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 GZMKP49863 264 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 RPS15AP62244 130 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 SNRPNP63162 240 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 RPS21P63220 83 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 BTN3A2P78410 334 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 MRPS15P82914 257 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 SPEM2Q0P670 501 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 TNK1Q13470 666 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 EFR3AQ14156 821 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 INSL4Q14641 139 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 DUSP5Q16690 384 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 TATDN3Q17R31 274 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 EIPR1Q53HC9 387 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 TMEM240Q5SV17 173 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 FIGNL1Q6PIW4 674 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 PLET1Q6UQ28 207 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 VITQ6UXI7 678 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 WDR88Q6ZMY6 472 aa4.82□□□□□ -1.64
ATPAF1-212ENST00000542495 TMPRSS11FQ6ZWK6 438 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms