RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 APOOLQ6UXV4 268 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 ZNF562Q6V9R5 426 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 ZNF841Q6ZN19 808 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 EFL1Q7Z2Z2 1120 aaKnown RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 ACOT1Q86TX2 421 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 TMEM17Q86X19 198 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 SAMD12Q8N8I0 201 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 WDSUB1Q8N9V3 476 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 BHLHE23Q8NDY6 225 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 CHDHQ8NE62 594 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 NUP37Q8NFH4 326 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 STXBP6Q8NFX7 210 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 OR5AU1Q8NGC0 362 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 OR2T3Q8NH03 318 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 SPPL2AQ8TCT8 520 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 SPRYD4Q8WW59 207 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 FBXO32Q969P5 355 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 MYLPFQ96A32 169 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 ZNF524Q96C55 264 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 ZNF501Q96CX3 271 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 GMPPAQ96IJ6 420 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 CDX2Q99626 313 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 SYT15Q9BQS2 421 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 TBC1D10AQ9BXI6 508 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 WDR13Q9H1Z4 485 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 Q9HAA7 133 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 WDR41Q9HAD4 459 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 FAM114A2Q9NRY5 505 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 DCAF13Q9NV06 445 aaKnown RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 RABL2AQ9UBK7 228 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 CIDEBQ9UHD4 219 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 PURGQ9UJV8 347 aaKnown RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 ZNF346Q9UL40 294 aaKnown RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 RPH3ALQ9UNE2 315 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 RNF6Q9Y252 685 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 MRPS28Q9Y2Q9 187 aaKnown RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 KLHDC2Q9Y2U9 406 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 MAB21L2Q9Y586 359 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 AUP1Q9Y679 476 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 CACNA1FO60840 1977 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 MAPK8IP3Q9UPT6 1336 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-217ENST00000541578 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-217ENST00000541578 RNF212BA8MTL3 300 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 TFECO14948 347 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-217ENST00000541578 EDIL3O43854 480 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 ZG16O60844 167 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 STX11O75558 287 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 SURF6O75683 361 aaKnown RBP3.55□□□□□ -1.84
SNHG1-217ENST00000541578 PDE5AO76074 875 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 NUDT14O95848 222 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 IGSF6O95976 241 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 IL1BP01584 269 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 PCCAP05165 728 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-217ENST00000541578 HSMCR30P0CW71 290 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 MYOGP15173 224 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 ZNF44P15621 663 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 MAGEA5P43359 124 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 DHPSP49366 369 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-217ENST00000541578 EMDP50402 254 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 NDST2P52849 883 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 ATP12AP54707 1039 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 NTHL1P78549 312 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 TNFRSF17Q02223 184 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 CNTN2Q02246 1040 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 RIGQ13278 110 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 VGLL4Q14135 290 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 MTF1Q14872 753 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 MLF2Q15773 248 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-217ENST00000541578 IMMTQ16891 758 aaKnown RBP3.55□□□□□ -1.84
SNHG1-217ENST00000541578 ZNF876PQ49A33 203 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 UNC50Q53HI1 259 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 DOK6Q6PKX4 331 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 SYT10Q6XYQ8 523 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 CDH26Q8IXH8 852 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 ZNF683Q8IZ20 524 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 METTL4Q8N3J2 472 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 SYT14Q8NB59 555 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 OR56B2PQ8NGI1 322 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 WBP1Q96G27 269 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 TPD52L3Q96J77 140 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 RPRD1AQ96P16 312 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-217ENST00000541578 PSKH2Q96QS6 385 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 F2RL3Q96RI0 385 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 OMDQ99983 421 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 C19orf43Q9BQ61 176 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 CABLES2Q9BTV7 478 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 RNF41Q9H4P4 317 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-217ENST00000541578 ZNF696Q9H7X3 374 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 NT5DC2Q9H857 520 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 ELOVL3Q9HB03 270 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 CD209Q9NNX6 404 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 EMCNQ9ULC0 261 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 EIF3LQ9Y262 564 aaKnown RBP3.55□□□□□ -1.84
SNHG1-217ENST00000541578 MRPS18CQ9Y3D5 142 aaKnown RBP3.55□□□□□ -1.84
SNHG1-217ENST00000541578 NAALAD2Q9Y3Q0 740 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 ASB3Q9Y575 518 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 SLCO1B1Q9Y6L6 691 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 DUOX1Q9NRD9 1551 aa3.55□□□□□ -1.84
SNHG1-217ENST00000541578 A0A0A6YYD4 124 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms