RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 RAP1GDS1P52306 607 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 GAS1P54826 345 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 HNRNPH2P55795 449 aaKnown RBP4.06□□□□□ -1.76
SNHG1-214ENST00000540865 PSPHP78330 225 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 IRF8Q02556 426 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 HGFACQ04756 655 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 MGAT5Q09328 741 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 KIF5AQ12840 1032 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 E2F2Q14209 437 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 SLMAPQ14BN4 828 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 P2RY6Q15077 328 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 NNATQ16517 81 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 PDK4Q16654 411 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 C18orf21Q32NC0 220 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-214ENST00000540865 GLYR1Q49A26 553 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-214ENST00000540865 SEL1L2Q5TEA6 688 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 C6orf163Q5TEZ5 329 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 OR5M10Q6IEU7 315 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 OR52E8Q6IFG1 317 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 FAM45BPQ6NSW5 357 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 ZNF544Q6NX49 715 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 USP43Q70EL4 1123 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 GSTA5Q7RTV2 222 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 GALNT7Q86SF2 657 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 ADAMTSL2Q86TH1 951 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 TBC1D1Q86TI0 1168 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-214ENST00000540865 CCDC25Q86WR0 208 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 CNTN4Q8IWV2 1026 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 LAS2Q8IYD9 372 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 FBXL14Q8N1E6 418 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 ZNF619Q8N2I2 560 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 MUC15Q8N387 334 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 TCAIMQ8N3R3 496 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 FADS6Q8N9I5 356 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 ZNF540Q8NDQ6 660 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 MCUQ8NE86 351 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 PIK3C3Q8NEB9 887 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 OR2M3Q8NG83 312 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 OR52B6Q8NGF0 335 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 FAM45AQ8TCE6 357 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 ZNF418Q8TF45 676 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-214ENST00000540865 TMBIM1Q969X1 311 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 NEIL1Q96FI4 390 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-214ENST00000540865 SLC35A4Q96G79 324 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 HES6Q96HZ4 224 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 HBEGFQ99075 208 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 DHRS9Q9BPW9 319 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 ZNF747Q9BV97 191 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 RBM4Q9BWF3 364 aaKnown RBP4.06□□□□□ -1.76
SNHG1-214ENST00000540865 SORBS1Q9BX66 1292 aaKnown RBP4.06□□□□□ -1.76
SNHG1-214ENST00000540865 ITPAQ9BY32 194 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 DDX47Q9H0S4 455 aaKnown RBP4.06□□□□□ -1.76
SNHG1-214ENST00000540865 TMPRSS5Q9H3S3 457 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 DSN1Q9H410 356 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 FOLH1BQ9HBA9 442 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 ZBTB26Q9HCK0 441 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 FBXO34Q9NWN3 711 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 EHD3Q9NZN3 535 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 PRODH2Q9UF12 536 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 ASIC3Q9UHC3 531 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 ZNF639Q9UID6 485 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 MCTS1Q9ULC4 181 aaKnown RBP4.06□□□□□ -1.76
SNHG1-214ENST00000540865 PACSIN2Q9UNF0 486 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-214ENST00000540865 MGAT4BQ9UQ53 548 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 MALRD1Q5VYJ5 2156 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 FREM3P0C091 2139 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 DYSFO75923 2080 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 HEATR5AQ86XA9 2040 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 A0A0A6YYD5 115 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 LOC390937A0A1W2PQ73 354 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 A0A1W2PS29 197 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 NPEPPSL1A6NEC2 478 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 H3BML4 177 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 TRIM77I1YAP6 450 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 PLPP1O14494 284 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 ABCD4O14678 606 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 PGRMC2O15173 223 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 TAPBPO15533 448 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 TMPRSS11DO60235 418 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 TSPAN2O60636 221 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 SH3BGRLO75368 114 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 REM1O75628 298 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 STK16O75716 305 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 IPO7O95373 1038 aaKnown RBP4.05□□□□□ -1.76
SNHG1-214ENST00000540865 SYNGR4O95473 234 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 LY86O95711 162 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 PLATP00750 562 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 FAM58BPP0C7Q3 252 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 GAAP10253 952 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 PCNAP12004 261 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 CPMP14384 443 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 PORP16435 677 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-214ENST00000540865 ZNF37AP17032 561 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-214ENST00000540865 AGTR1P30556 359 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 PIK3CBP42338 1070 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 MAGEA3P43357 314 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 FABP6P51161 128 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 XKP51811 444 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 ARFIP2P53365 341 aa4.05□□□□□ -1.76
SNHG1-214ENST00000540865 PGGT1BP53609 377 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms