RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 PRKCDQ05655 676 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.72□□□□□ -0.21
TSFM-207ENST00000540550 TMEM44Q2T9K0 475 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 PRAMEF17Q5VTA0 474 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 MED25Q71SY5 747 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 ADCK1Q86TW2 530 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 ZBTB46Q86UZ6 589 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 OR2T33Q8NG76 320 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 OR4Q3Q8NH05 313 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 PFN4Q8NHR9 129 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 PTPMT1Q8WUK0 201 aaPredicted RBP13.72□□□□□ -0.21
TSFM-207ENST00000540550 RPL3LQ92901 407 aaKnown RBP13.72□□□□□ -0.21
TSFM-207ENST00000540550 ZHX1-C8orf76Q96EF9 292 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 SENP5Q96HI0 755 aaPredicted RBP13.72□□□□□ -0.21
TSFM-207ENST00000540550 OR5M11Q96RB7 305 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 MGLLQ99685 303 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 DPH1Q9BZG8 443 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 RACGAP1Q9H0H5 632 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 FGF21Q9NSA1 209 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 PILRBQ9UKJ0 227 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 GPR52Q9Y2T5 361 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 CLCA3PQ9Y6N3 262 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 COL5A1P20908 1838 aaPredicted RBP13.72□□□□□ -0.21
TSFM-207ENST00000540550 A0A0B4J2E0 115 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 A0A1B0GTQ1 180 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 A0A1B0GWA3 101 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 A0A1B0GX12 115 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 A0A1B0GX78 115 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 NPIPB9F8W1W9 429 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 CDC42EP2O14613 210 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 MYL12BO14950 172 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 TOX3O15405 576 aaPredicted RBP13.72□□□□□ -0.21
TSFM-207ENST00000540550 LAMTOR5O43504 91 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 PDGFBP01127 241 aaPredicted RBP13.72□□□□□ -0.21
TSFM-207ENST00000540550 ADRA2AP08913 450 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 PNLIPP16233 465 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 RORAP35398 523 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 GCGRP47871 477 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 RGS6P49758 472 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 PLAURQ03405 335 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 C1orf189Q5VU69 101 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 RPL13AP3Q6NVV1 102 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 ANKK1Q8NFD2 765 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 BRIX1Q8TDN6 353 aaKnown RBP13.72□□□□□ -0.21
TSFM-207ENST00000540550 PIGKQ92643 395 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 TSLPQ969D9 159 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 SAMD8Q96LT4 415 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 SLC7A5P2Q9GIP4 190 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 OR8D2Q9GZM6 311 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 PRMT8Q9NR22 394 aaPredicted RBP13.72□□□□□ -0.21
TSFM-207ENST00000540550 MED17Q9NVC6 651 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 DIMT1Q9UNQ2 313 aaKnown RBP13.72□□□□□ -0.21
TSFM-207ENST00000540550 CFL2Q9Y281 166 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 ASXL3Q9C0F0 2248 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 CACNA1EQ15878 2313 aa13.72□□□□□ -0.21
TSFM-207ENST00000540550 PI4KAP42356 2102 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 RP1P56715 2156 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 IGKV3D-11A0A0A0MRZ8 115 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 POLR1CO15160 346 aaPredicted RBP13.71□□□□□ -0.21
TSFM-207ENST00000540550 SURF4O15260 269 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 CH25HO95992 272 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 CSTAP01040 98 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 ZXDAP98168 799 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.71□□□□□ -0.21
TSFM-207ENST00000540550 C1DQ13901 141 aaKnown RBP13.71□□□□□ -0.21
TSFM-207ENST00000540550 TSTQ16762 297 aaKnown RBP13.71□□□□□ -0.21
TSFM-207ENST00000540550 RNLSQ5VYX0 342 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 TMEM71Q6P5X7 295 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 HSDL2Q6YN16 418 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 ARHGAP22Q7Z5H3 698 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 BMP8AQ7Z5Y6 402 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 CROCCP3Q8IVE0 287 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 CACTIN-AS1Q8N1I8 211 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 CADM2Q8N3J6 435 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 OR52I1Q8NGK6 324 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 OR4C6Q8NH72 309 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 FGF11Q92914 225 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 RFKQ969G6 155 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 ZNF501Q96CX3 271 aaPredicted RBP13.71□□□□□ -0.21
TSFM-207ENST00000540550 ARSGQ96EG1 525 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 RNFT2Q96EX2 444 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 SLC46A1Q96NT5 459 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 SIDT1Q9NXL6 827 aaKnown RBP13.71□□□□□ -0.21
TSFM-207ENST00000540550 FLRT3Q9NZU0 649 aa13.71□□□□□ -0.21
TSFM-207ENST00000540550 ARID1BQ8NFD5 2236 aaPredicted RBP13.71□□□□□ -0.21
TSFM-207ENST00000540550 LOC100506127A0A0U1RQW1 187 aa13.7□□□□□ -0.22
TSFM-207ENST00000540550 SERINC4A6NH21 518 aa13.7□□□□□ -0.22
TSFM-207ENST00000540550 KDM4EB2RXH2 506 aaPredicted RBP13.7□□□□□ -0.22
TSFM-207ENST00000540550 RCBTB2O95199 551 aa13.7□□□□□ -0.22
TSFM-207ENST00000540550 NADKO95544 446 aaPredicted RBP13.7□□□□□ -0.22
TSFM-207ENST00000540550 SAGP10523 405 aaPredicted RBP13.7□□□□□ -0.22
TSFM-207ENST00000540550 CKMT1AP12532 417 aa13.7□□□□□ -0.22
TSFM-207ENST00000540550 BMP7P18075 431 aa13.7□□□□□ -0.22
TSFM-207ENST00000540550 MYL12AP19105 171 aa13.7□□□□□ -0.22
TSFM-207ENST00000540550 MAKP20794 623 aa13.7□□□□□ -0.22
TSFM-207ENST00000540550 RBM34P42696 430 aaKnown RBP13.7□□□□□ -0.22
TSFM-207ENST00000540550 ACAA2P42765 397 aaKnown RBP13.7□□□□□ -0.22
TSFM-207ENST00000540550 SLC37A1P57057 533 aa13.7□□□□□ -0.22
TSFM-207ENST00000540550 RAB40BQ12829 278 aa13.7□□□□□ -0.22
TSFM-207ENST00000540550 ELAVL1Q15717 326 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms