RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 MUCL1Q96DR8 90 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 CHMP6Q96FZ7 201 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 MS4A4EQ96PG1 132 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 POTEKPQ9BYX7 375 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 GSTO2Q9H4Y5 243 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 CISD1Q9NZ45 108 aaKnown RBP11.11□□□□□ -0.63
COPS7A-211ENST00000540408 SH3BP4Q9P0V3 963 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 KLHL13Q9P2N7 655 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 DCDC2Q9UHG0 476 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 FBN1P35555 2871 aaKnown RBP11.1□□□□□ -0.63
COPS7A-211ENST00000540408 COL6A5A8TX70 2615 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 A0A1W2PQD3 144 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 H3BNH8 94 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 ADAM11O75078 769 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 DDX5P17844 614 aaKnown RBP11.1□□□□□ -0.63
COPS7A-211ENST00000540408 ELK4P28324 431 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 MAP3K8P41279 467 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 PRIM2P49643 509 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 FOXA1P55317 472 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 BSPH1Q075Z2 132 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 CFAP157Q5JU67 520 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 AGAP6Q5VW22 663 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 BHLHA15Q7RTS1 189 aaPredicted RBP11.1□□□□□ -0.63
COPS7A-211ENST00000540408 NUFIP2Q7Z417 695 aaKnown RBP11.1□□□□□ -0.63
COPS7A-211ENST00000540408 MTERF4Q7Z6M4 381 aaKnown RBP11.1□□□□□ -0.63
COPS7A-211ENST00000540408 PHC2Q8IXK0 858 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 SLC16A11Q8NCK7 471 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 POC1BQ8TC44 478 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 FAM110BQ8TC76 370 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 PHOSPHO1Q8TCT1 267 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 JADE3Q92613 823 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 HOXB13Q92826 284 aaPredicted RBP11.1□□□□□ -0.63
COPS7A-211ENST00000540408 ARL8AQ96BM9 186 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 PPCDCQ96CD2 204 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 EGLN2Q96KS0 407 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 NPAS1Q99742 590 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 GRIP2Q9C0E4 1043 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 GPC6Q9Y625 555 aaPredicted RBP11.1□□□□□ -0.63
COPS7A-211ENST00000540408 ZANQ9Y493 2812 aa11.1□□□□□ -0.63
COPS7A-211ENST00000540408 GOLGA8RI6L899 631 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 KIF2AO00139 706 aaPredicted RBP11.09□□□□□ -0.63
COPS7A-211ENST00000540408 SLC28A1O00337 649 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 UBFD1O14562 309 aaKnown RBP11.09□□□□□ -0.63
COPS7A-211ENST00000540408 ZNF195O14628 629 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 RGS14O43566 566 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 IGHV4-39P01824 125 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 LINGO3P0C6S8 592 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 UROSP10746 265 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 MYL2P10916 166 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 ATP6V1C1P21283 382 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 POU6F2P78424 691 aaPredicted RBP11.09□□□□□ -0.63
COPS7A-211ENST00000540408 STK11Q15831 433 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 DUSP5Q16690 384 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 PGGHGQ32M88 737 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 TMEM176BQ3YBM2 270 aaPredicted RBP11.09□□□□□ -0.63
COPS7A-211ENST00000540408 TDRPQ86YL5 185 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 KBTBD8Q8NFY9 601 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 FBXO30Q8TB52 745 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 NEUROG1Q92886 237 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 CIDECQ96AQ7 238 aaPredicted RBP11.09□□□□□ -0.63
COPS7A-211ENST00000540408 ZNF764Q96H86 408 aaPredicted RBP11.09□□□□□ -0.63
COPS7A-211ENST00000540408 RADILQ96JH8 1075 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 ADAD1Q96M93 576 aaKnown RBP11.09□□□□□ -0.63
COPS7A-211ENST00000540408 TRAF4Q9BUZ4 470 aaPredicted RBP11.09□□□□□ -0.63
COPS7A-211ENST00000540408 BTBD2Q9BX70 525 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 TRIM2Q9C040 744 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 HOXD1Q9GZZ0 328 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 REEP4Q9H6H4 257 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 ACSS1Q9NUB1 689 aaPredicted RBP11.09□□□□□ -0.63
COPS7A-211ENST00000540408 C1orf109Q9NX04 203 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 NTMQ9P121 344 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 KLHL9Q9P2J3 617 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 CDC42EP3Q9UKI2 254 aa11.09□□□□□ -0.63
COPS7A-211ENST00000540408 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.08□□□□□ -0.64
COPS7A-211ENST00000540408 DPRXA6NFQ7 191 aa11.08□□□□□ -0.64
COPS7A-211ENST00000540408 GTPBP1O00178 669 aaKnown RBP11.08□□□□□ -0.64
COPS7A-211ENST00000540408 SSX4O60224 188 aa11.08□□□□□ -0.64
COPS7A-211ENST00000540408 NTN1O95631 604 aa11.08□□□□□ -0.64
COPS7A-211ENST00000540408 ABHD2P08910 425 aa11.08□□□□□ -0.64
COPS7A-211ENST00000540408 ACP2P11117 423 aa11.08□□□□□ -0.64
COPS7A-211ENST00000540408 SLC7A1P30825 629 aa11.08□□□□□ -0.64
COPS7A-211ENST00000540408 P2RX1P51575 399 aa11.08□□□□□ -0.64
COPS7A-211ENST00000540408 NUDT6P53370 316 aa11.08□□□□□ -0.64
COPS7A-211ENST00000540408 DSCR9P59020 149 aa11.08□□□□□ -0.64
COPS7A-211ENST00000540408 FOXF1Q12946 379 aa11.08□□□□□ -0.64
COPS7A-211ENST00000540408 PPA1Q15181 289 aa11.08□□□□□ -0.64
COPS7A-211ENST00000540408 ANKRD26P1Q6NSI1 321 aa11.08□□□□□ -0.64
COPS7A-211ENST00000540408 LRIG3Q6UXM1 1119 aa11.08□□□□□ -0.64
COPS7A-211ENST00000540408 Q6ZT83 130 aa11.08□□□□□ -0.64
COPS7A-211ENST00000540408 R3HCC1LQ7Z5L2 792 aaKnown RBP11.08□□□□□ -0.64
COPS7A-211ENST00000540408 P2RY8Q86VZ1 359 aa11.08□□□□□ -0.64
COPS7A-211ENST00000540408 HOMEZQ8IX15 550 aa11.08□□□□□ -0.64
COPS7A-211ENST00000540408 ATP6V1C2Q8NEY4 427 aa11.08□□□□□ -0.64
COPS7A-211ENST00000540408 FBXO27Q8NI29 283 aa11.08□□□□□ -0.64
COPS7A-211ENST00000540408 ZFP90Q8TF47 636 aa11.08□□□□□ -0.64
COPS7A-211ENST00000540408 GIMAP5Q96F15 307 aa11.08□□□□□ -0.64
COPS7A-211ENST00000540408 SRXN1Q9BYN0 137 aa11.08□□□□□ -0.64
COPS7A-211ENST00000540408 GDF2Q9UK05 429 aaPredicted RBP11.08□□□□□ -0.64
COPS7A-211ENST00000540408 ATRQ13535 2644 aa11.07□□□□□ -0.64
COPS7A-211ENST00000540408 AKAP10O43572 662 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms