RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 GALNTL5Q7Z4T8 443 aa14.12□□□□□ -0.15
DDB1-216ENST00000539739 MARCH3Q86UD3 253 aa14.12□□□□□ -0.15
DDB1-216ENST00000539739 ARMC8Q8IUR7 673 aa14.12□□□□□ -0.15
DDB1-216ENST00000539739 RBMXL3Q8N7X1 1067 aaKnown RBP14.12□□□□□ -0.15
DDB1-216ENST00000539739 EXD3Q8N9H8 876 aa14.12□□□□□ -0.15
DDB1-216ENST00000539739 FAM98AQ8NCA5 519 aaKnown RBP14.12□□□□□ -0.15
DDB1-216ENST00000539739 ANKK1Q8NFD2 765 aa14.12□□□□□ -0.15
DDB1-216ENST00000539739 BHLHE22Q8NFJ8 381 aaPredicted RBP14.12□□□□□ -0.15
DDB1-216ENST00000539739 PHOSPHO1Q8TCT1 267 aa14.12□□□□□ -0.15
DDB1-216ENST00000539739 RASSF5Q8WWW0 418 aa14.12□□□□□ -0.15
DDB1-216ENST00000539739 WBP1Q96G27 269 aa14.12□□□□□ -0.15
DDB1-216ENST00000539739 CLPTM1LQ96KA5 538 aa14.12□□□□□ -0.15
DDB1-216ENST00000539739 FAM173AQ9BQD7 235 aa14.12□□□□□ -0.15
DDB1-216ENST00000539739 MFRPQ9BY79 579 aa14.12□□□□□ -0.15
DDB1-216ENST00000539739 SLC25A18Q9H1K4 315 aa14.12□□□□□ -0.15
DDB1-216ENST00000539739 MAGEL2Q9UJ55 1249 aa14.12□□□□□ -0.15
DDB1-216ENST00000539739 B3GNT3Q9Y2A9 372 aa14.12□□□□□ -0.15
DDB1-216ENST00000539739 SLC35A3Q9Y2D2 325 aa14.12□□□□□ -0.15
DDB1-216ENST00000539739 CARD8Q9Y2G2 431 aa14.12□□□□□ -0.15
DDB1-216ENST00000539739 WIF1Q9Y5W5 379 aa14.12□□□□□ -0.15
DDB1-216ENST00000539739 CACNA1BQ00975 2339 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 SERINC4A6NH21 518 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 G3V3Y1 287 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 GTPBP1O00178 669 aaKnown RBP14.11□□□□□ -0.15
DDB1-216ENST00000539739 PEX1O43933 1283 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 THBS1P07996 1170 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 PABPC4LP0CB38 370 aaKnown RBP14.11□□□□□ -0.15
DDB1-216ENST00000539739 NID1P14543 1247 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 MSX2P35548 267 aaPredicted RBP14.11□□□□□ -0.15
DDB1-216ENST00000539739 MASP1P48740 699 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 GPR85P60893 370 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 KCNJ10P78508 379 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 C17orf67Q0P5P2 114 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 MAPK14Q16539 360 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 ZSWIM7Q19AV6 140 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 APOOLQ6UXV4 268 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 HMGN2P46Q86SG4 172 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 PTRH1Q86Y79 214 aaKnown RBP14.11□□□□□ -0.15
DDB1-216ENST00000539739 SULF2Q8IWU5 870 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 CMIPQ8IY22 773 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 FAM162AQ96A26 154 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 HES7Q9BYE0 225 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 MUC13Q9H3R2 512 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 DCLRE1BQ9H816 532 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 GALNT9Q9HCQ5 603 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 RHBDL2Q9NX52 303 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 PPP4R1LQ9P1A2 415 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 KCNE5Q9UJ90 142 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 SNX13Q9Y5W8 968 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 TNRC6AQ8NDV7 1962 aaKnown RBP14.11□□□□□ -0.15
DDB1-216ENST00000539739 EXPH5Q8NEV8 1989 aa14.11□□□□□ -0.15
DDB1-216ENST00000539739 NCK1P16333 377 aa14.1□□□□□ -0.15
DDB1-216ENST00000539739 ADH7P40394 386 aa14.1□□□□□ -0.15
DDB1-216ENST00000539739 PTGDSP41222 190 aa14.1□□□□□ -0.15
DDB1-216ENST00000539739 DNASE1L1P49184 302 aa14.1□□□□□ -0.15
DDB1-216ENST00000539739 GAS1P54826 345 aa14.1□□□□□ -0.15
DDB1-216ENST00000539739 TRIM25Q14258 630 aaKnown RBP14.1□□□□□ -0.15
DDB1-216ENST00000539739 FGFBP1Q14512 234 aa14.1□□□□□ -0.15
DDB1-216ENST00000539739 FOXB2Q5VYV0 432 aa14.1□□□□□ -0.15
DDB1-216ENST00000539739 PGM2L1Q6PCE3 622 aa14.1□□□□□ -0.15
DDB1-216ENST00000539739 VRK2Q86Y07 508 aa14.1□□□□□ -0.15
DDB1-216ENST00000539739 ULK2Q8IYT8 1036 aa14.1□□□□□ -0.15
DDB1-216ENST00000539739 TEX19Q8NA77 164 aa14.1□□□□□ -0.15
DDB1-216ENST00000539739 GATSQ8NAP1 163 aa14.1□□□□□ -0.15
DDB1-216ENST00000539739 CCDC124Q96CT7 223 aaKnown RBP14.1□□□□□ -0.15
DDB1-216ENST00000539739 JSRP1Q96MG2 331 aaPredicted RBP14.1□□□□□ -0.15
DDB1-216ENST00000539739 PCDHAC1Q9H158 963 aa14.1□□□□□ -0.15
DDB1-216ENST00000539739 OCEL1Q9H607 264 aa14.1□□□□□ -0.15
DDB1-216ENST00000539739 FAIMQ9NVQ4 179 aa14.1□□□□□ -0.15
DDB1-216ENST00000539739 SLC13A4Q9UKG4 626 aa14.1□□□□□ -0.15
DDB1-216ENST00000539739 BOKQ9UMX3 212 aaPredicted RBP14.1□□□□□ -0.15
DDB1-216ENST00000539739 ZNF443Q9Y2A4 671 aaPredicted RBP14.1□□□□□ -0.15
DDB1-216ENST00000539739 CENPVL1A0A0U1RR11 272 aa14.09□□□□□ -0.15
DDB1-216ENST00000539739 C2orf72A6NCS6 295 aa14.09□□□□□ -0.15
DDB1-216ENST00000539739 GCM2O75603 506 aaPredicted RBP14.09□□□□□ -0.15
DDB1-216ENST00000539739 MFN2O95140 757 aa14.09□□□□□ -0.15
DDB1-216ENST00000539739 CSTAP01040 98 aa14.09□□□□□ -0.15
DDB1-216ENST00000539739 OPN1SWP03999 348 aa14.09□□□□□ -0.15
DDB1-216ENST00000539739 PRKAR1BP31321 381 aa14.09□□□□□ -0.15
DDB1-216ENST00000539739 ELOAQ14241 798 aaKnown RBP14.09□□□□□ -0.15
DDB1-216ENST00000539739 FXNQ16595 210 aa14.09□□□□□ -0.15
DDB1-216ENST00000539739 EIPR1Q53HC9 387 aa14.09□□□□□ -0.15
DDB1-216ENST00000539739 OR2M7Q8NG81 312 aa14.09□□□□□ -0.15
DDB1-216ENST00000539739 OR1J4Q8NGS1 313 aa14.09□□□□□ -0.15
DDB1-216ENST00000539739 DUSP19Q8WTR2 217 aa14.09□□□□□ -0.15
DDB1-216ENST00000539739 PNPLA2Q96AD5 504 aa14.09□□□□□ -0.15
DDB1-216ENST00000539739 ASB9Q96DX5 294 aa14.09□□□□□ -0.15
DDB1-216ENST00000539739 TMEM41AQ96HV5 264 aa14.09□□□□□ -0.15
DDB1-216ENST00000539739 ZNF597Q96LX8 424 aa14.09□□□□□ -0.15
DDB1-216ENST00000539739 PINK1Q9BXM7 581 aa14.09□□□□□ -0.15
DDB1-216ENST00000539739 GORASP2Q9H8Y8 452 aa14.09□□□□□ -0.15
DDB1-216ENST00000539739 PROK2Q9HC23 129 aa14.09□□□□□ -0.15
DDB1-216ENST00000539739 DEPPQ9NTK1 212 aa14.09□□□□□ -0.15
DDB1-216ENST00000539739 ADPRHL2Q9NX46 363 aa14.09□□□□□ -0.15
DDB1-216ENST00000539739 ARPC2O15144 300 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 ZNF264O43296 627 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 TRIM3O75382 744 aaPredicted RBP14.08□□□□□ -0.15
DDB1-216ENST00000539739 MTRF1O75570 445 aaKnown RBP14.08□□□□□ -0.15
DDB1-216ENST00000539739 UBL4AP11441 157 aa14.08□□□□□ -0.15
DDB1-216ENST00000539739 ELAVL4P26378 380 aaKnown RBP14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms