RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 TMPRSS11FQ6ZWK6 438 aa12.33□□□□□ -0.43
UBE3B-209ENST00000539584 HMGN2P46Q86SG4 172 aa12.33□□□□□ -0.43
UBE3B-209ENST00000539584 C12orf40Q86WS4 652 aa12.33□□□□□ -0.43
UBE3B-209ENST00000539584 LRRC25Q8N386 305 aaPredicted RBP12.33□□□□□ -0.43
UBE3B-209ENST00000539584 TRMT10AQ8TBZ6 339 aaKnown RBP12.33□□□□□ -0.43
UBE3B-209ENST00000539584 CREBZFQ9NS37 354 aa12.33□□□□□ -0.43
UBE3B-209ENST00000539584 TMEM39AQ9NV64 488 aa12.33□□□□□ -0.43
UBE3B-209ENST00000539584 ZNF223Q9UK11 482 aaPredicted RBP12.33□□□□□ -0.43
UBE3B-209ENST00000539584 MGAT4AQ9UM21 535 aa12.33□□□□□ -0.43
UBE3B-209ENST00000539584 SLC35A3Q9Y2D2 325 aa12.33□□□□□ -0.43
UBE3B-209ENST00000539584 DENND4AQ7Z401 1863 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 TEX13CA0A0J9YWL9 993 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 EEF1E1O43324 174 aaKnown RBP12.33□□□□□ -0.44
UBE3B-209ENST00000539584 HYAL3O43820 417 aaPredicted RBP12.33□□□□□ -0.44
UBE3B-209ENST00000539584 PRKRAO75569 313 aaKnown RBP12.33□□□□□ -0.44
UBE3B-209ENST00000539584 ARL6IP5O75915 188 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 SLC2A10O95528 541 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 IFNA7P01567 189 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 DBIP07108 87 aaKnown RBP12.33□□□□□ -0.44
UBE3B-209ENST00000539584 ZGLP1P0C6A0 271 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 RAB3BP20337 219 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 C4BPBP20851 252 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 EPHA4P54764 986 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 EEF1A1P68104 462 aaKnown RBP12.33□□□□□ -0.44
UBE3B-209ENST00000539584 DUSP2Q05923 314 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 LRRC32Q14392 662 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 KRT33BQ14525 404 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 ZNF234Q14588 700 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 MLF2Q15773 248 aaPredicted RBP12.33□□□□□ -0.44
UBE3B-209ENST00000539584 SLC36A2Q495M3 483 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 C18orf63Q68DL7 685 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 CEACAM19Q7Z692 300 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 GPR135Q8IZ08 494 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 ZNF680Q8NEM1 530 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 OR2L3Q8NG85 312 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 KLK6Q92876 244 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 NXPE3Q969Y0 559 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 GAL3ST3Q96A11 431 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 ZSWIM3Q96MP5 696 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 ABHD1Q96SE0 405 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 TEAD3Q99594 435 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 PRSS27Q9BQR3 290 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 TRMT61BQ9BVS5 477 aaKnown RBP12.33□□□□□ -0.44
UBE3B-209ENST00000539584 TMEM168Q9H0V1 697 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 POLMQ9NP87 494 aaPredicted RBP12.33□□□□□ -0.44
UBE3B-209ENST00000539584 ZFP64Q9NPA5 681 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 EQTNQ9NQ60 294 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 NUDT15Q9NV35 164 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 C14orf105Q9NVL8 296 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 EIF3KQ9UBQ5 218 aaKnown RBP12.33□□□□□ -0.44
UBE3B-209ENST00000539584 CAMK2AQ9UQM7 478 aa12.33□□□□□ -0.44
UBE3B-209ENST00000539584 TBC1D3EA0A087X179 549 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 A0A0G2JK05 382 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 LANCL1O43813 399 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 FCMRO60667 390 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 IFI6P09912 130 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 SBK2P0C263 348 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 LINC00271P0C7V0 271 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 C8orf89P0DMQ9 161 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 CERS1P27544 350 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 ZNF136P52737 540 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 RGS1Q08116 209 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 MAPK14Q16539 360 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 UAP1L1Q3KQV9 507 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 GARNL3Q5VVW2 1013 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 DMKNQ6E0U4 476 aaPredicted RBP12.32□□□□□ -0.44
UBE3B-209ENST00000539584 ZNF836Q6ZNA1 936 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 MTSS1LQ765P7 747 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 BTN2A1Q7KYR7 527 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 KRT74Q7RTS7 529 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 C11orf74Q86VG3 221 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 OR2L13Q8N349 312 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 EID2Q8N6I1 236 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 ZNF655Q8N720 491 aaPredicted RBP12.32□□□□□ -0.44
UBE3B-209ENST00000539584 OR56B4Q8NH76 319 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 TMEM239Q8WW34 195 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 SUSD6Q92537 303 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 KISS1RQ969F8 398 aaPredicted RBP12.32□□□□□ -0.44
UBE3B-209ENST00000539584 SORCS2Q96PQ0 1159 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 LGR4Q9BXB1 951 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 CLEC4MQ9H2X3 399 aaPredicted RBP12.32□□□□□ -0.44
UBE3B-209ENST00000539584 WDR26Q9H7D7 661 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 PHPT1Q9NRX4 125 aaPredicted RBP12.32□□□□□ -0.44
UBE3B-209ENST00000539584 TM7SF3Q9NS93 570 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 HEBP2Q9Y5Z4 205 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 SIRT4Q9Y6E7 314 aaPredicted RBP12.32□□□□□ -0.44
UBE3B-209ENST00000539584 TUBAL3A6NHL2 446 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 SLC9B1P1A6NJY1 282 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 FAM183AA6NL82 134 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 RIIAD1A6NNX1 92 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 LRRN3E7EW58 273 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 ZNF749O43361 778 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 PIP5K1CO60331 668 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 PRAF2O60831 178 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 GATBO75879 557 aaKnown RBP12.32□□□□□ -0.44
UBE3B-209ENST00000539584 ZIC2O95409 532 aaPredicted RBP12.32□□□□□ -0.44
UBE3B-209ENST00000539584 AK1P00568 194 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 TFPIP10646 304 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 TBXA2RP21731 343 aa12.32□□□□□ -0.44
UBE3B-209ENST00000539584 RPS4Y1P22090 263 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms