RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 ATXN7L1Q9ULK2 861 aaPredicted RBP6.1□□□□□ -1.43
LSAMP-207ENST00000539563 CDHR4A6H8M9 788 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 SMAD6O43541 496 aaKnown RBP6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF14P17017 642 aaPredicted RBP6.1□□□□□ -1.43
LSAMP-207ENST00000539563 GCH1P30793 250 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 HTR6P50406 440 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 SGSHP51688 502 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ARG2P78540 354 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 OR7A5Q15622 319 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 PCGF3Q3KNV8 242 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 RAB6CQ53S08 254 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 DPY19L2P1Q6NXN4 242 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF761Q86XN6 746 aaPredicted RBP6.1□□□□□ -1.43
LSAMP-207ENST00000539563 IQCF1Q8N6M8 205 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 FNDC8Q8TC99 324 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ASB11Q8WXH4 323 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 CDS1Q92903 461 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 TOX2Q96NM4 488 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF649Q9BS31 505 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 RAB6CQ9H0N0 254 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 LHX3Q9UBR4 397 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 IER3IP1Q9Y5U9 82 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF705EA8MWA4 302 aaPredicted RBP6.1□□□□□ -1.43
LSAMP-207ENST00000539563 SULT2B1O00204 365 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 CYB5BO43169 146 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 CRTAPO75718 401 aaPredicted RBP6.1□□□□□ -1.43
LSAMP-207ENST00000539563 HTR3BO95264 441 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 AKAIN1P0CW23 69 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 TAS2R20P59543 309 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 BCL2A1Q16548 175 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 FAM26DQ5JW98 314 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ENTPD8Q5MY95 495 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 CTSL3PQ5NE16 218 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 AKR1C8PQ5T2L2 129 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 FAM198BQ6UWH4 519 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 PHC2Q8IXK0 858 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ASCC1Q8N9N2 400 aaKnown RBP6.1□□□□□ -1.43
LSAMP-207ENST00000539563 OR5D16Q8NGK9 328 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 FRS2Q8WU20 508 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 C7orf34Q96L11 122 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 CCNL2Q96S94 520 aaPredicted RBP6.1□□□□□ -1.43
LSAMP-207ENST00000539563 SLC46A2Q9BY10 475 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 BOKQ9UMX3 212 aaPredicted RBP6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ARAP2Q8WZ64 1704 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 TRBV11-1A0A0K0K1C0 115 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 NARSO43776 548 aaKnown RBP6.09□□□□□ -1.43
LSAMP-207ENST00000539563 CSF1P09603 554 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 TUBG1P23258 451 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 IL4RP24394 825 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 DLSTP36957 453 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 VEGFBP49765 207 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 BMXP51813 675 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 EPHA4P54764 986 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 NCS1P62166 190 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 GGTA1PQ4G0N0 100 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 CCDC58Q4VC31 144 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 HES5Q5TA89 166 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 MEPCEQ7L2J0 689 aaKnown RBP6.09□□□□□ -1.43
LSAMP-207ENST00000539563 OR14K1Q8NGZ2 314 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 RHBDD1Q8TEB9 315 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 FGF13Q92913 245 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 SORT1Q99523 831 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 CENPOQ9BU64 300 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 SAP130Q9H0E3 1048 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 TSPAN10Q9H1Z9 355 aaPredicted RBP6.09□□□□□ -1.43
LSAMP-207ENST00000539563 RLIMQ9NVW2 624 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 TESQ9UGI8 421 aaKnown RBP6.09□□□□□ -1.43
LSAMP-207ENST00000539563 ACTL7AQ9Y615 435 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 CNOT4O95628 575 aaKnown RBP6.09□□□□□ -1.43
LSAMP-207ENST00000539563 C1SP09871 688 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 CD38P28907 300 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 SOX3P41225 446 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 VASPP50552 380 aaPredicted RBP6.09□□□□□ -1.43
LSAMP-207ENST00000539563 AKR1C2P52895 323 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 PIN1Q13526 163 aaPredicted RBP6.09□□□□□ -1.43
LSAMP-207ENST00000539563 KIAA1211LQ6NV74 962 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 ANKRD54Q6NXT1 300 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 SBSNQ6UWP8 590 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 ALKAL1Q6UXT8 129 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 TMEM184AQ6ZMB5 413 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 CFAP77Q6ZQR2 320 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 PARS2Q7L3T8 475 aaKnown RBP6.09□□□□□ -1.43
LSAMP-207ENST00000539563 DOK4Q8TEW6 326 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 TOE1Q96GM8 510 aaKnown RBP6.09□□□□□ -1.43
LSAMP-207ENST00000539563 OR2S2Q9NQN1 319 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 MRPL15Q9P015 296 aaKnown RBP6.09□□□□□ -1.43
LSAMP-207ENST00000539563 USP36Q9P275 1121 aaKnown RBP6.09□□□□□ -1.43
LSAMP-207ENST00000539563 GJD2Q9UKL4 321 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 PCDHGA8Q9Y5G5 932 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 COL16A1Q07092 1604 aaPredicted RBP6.09□□□□□ -1.43
LSAMP-207ENST00000539563 EGFP01133 1207 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 PKLRP30613 574 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 ETV6P41212 452 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 DOCK1Q14185 1865 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 HSF5Q4G112 596 aaPredicted RBP6.09□□□□□ -1.43
LSAMP-207ENST00000539563 GALNT10Q86SR1 603 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 DTX3Q8N9I9 347 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 B3GNT7Q8NFL0 401 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 CHRDQ9H2X0 955 aa6.09□□□□□ -1.43
LSAMP-207ENST00000539563 APMAPQ9HDC9 416 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms