RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 ANKRD34CP0C6C1 535 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 GKN3PP0CG01 181 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 CFL1P23528 166 aaKnown RBP18.88■□□□□ 0.61
TMEM260-203ENST00000539559 AP2S1P53680 142 aaPredicted RBP18.88■□□□□ 0.61
TMEM260-203ENST00000539559 VSX2P58304 361 aaPredicted RBP18.88■□□□□ 0.61
TMEM260-203ENST00000539559 LGALSLQ3ZCW2 172 aaPredicted RBP18.88■□□□□ 0.61
TMEM260-203ENST00000539559 CYB561A3Q8NBI2 242 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 CEP76Q8TAP6 659 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 ACOT12Q8WYK0 555 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 GCDHQ92947 438 aaPredicted RBP18.88■□□□□ 0.61
TMEM260-203ENST00000539559 SLC35A4Q96G79 324 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 ZNF514Q96K75 400 aaPredicted RBP18.88■□□□□ 0.61
TMEM260-203ENST00000539559 OR52D1Q9H346 318 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 DPAGT1Q9H3H5 408 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 CCDC86Q9H6F5 360 aaKnown RBP18.88■□□□□ 0.61
TMEM260-203ENST00000539559 ENTPD4Q9Y227 616 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 TMEM5Q9Y2B1 443 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 A0A0G2JK05 382 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 A8MUA0 341 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 MPC2O95563 127 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 CFDP00746 253 aaPredicted RBP18.87■□□□□ 0.61
TMEM260-203ENST00000539559 ERGP11308 486 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 ANXA3P12429 323 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 DRD2P14416 443 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 PRKACBP22694 351 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 NOS3P29474 1203 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 NUDT1P36639 197 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 HCCSP53701 268 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 ZNF77Q15935 545 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 ST3GAL2Q16842 350 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 FNDC3BQ53EP0 1204 aaKnown RBP18.87■□□□□ 0.61
TMEM260-203ENST00000539559 PXDC1Q5TGL8 231 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 NIPAL3Q6P499 406 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 TOMM5Q8N4H5 51 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 MSANTD3Q96H12 275 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 MARK1Q9P0L2 795 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 A0A1W2PRG6 482 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 C7orf66A4D0T2 115 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 SHOXO15266 292 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 KLF4O43474 513 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 NPR2P20594 1047 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 RFX3P48380 749 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 OR12D2P58182 307 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 POU6F2P78424 691 aaPredicted RBP18.87■□□□□ 0.61
TMEM260-203ENST00000539559 RGS1Q08116 209 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 ZNF267Q14586 743 aaPredicted RBP18.87■□□□□ 0.61
TMEM260-203ENST00000539559 ZSWIM7Q19AV6 140 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 FAM111BQ6SJ93 734 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 WDR88Q6ZMY6 472 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 MBOAT2Q6ZWT7 520 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 RFLNBQ8N5W9 214 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 CDS1Q92903 461 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 C4orf36Q96KX1 117 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 CACNG6Q9BXT2 260 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 TEX12Q9BXU0 123 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 NLGN3Q9NZ94 848 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 OR1A2Q9Y585 309 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 MYOGP15173 224 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 MAKP20794 623 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 HIST1H1TP22492 207 aaPredicted RBP18.87■□□□□ 0.61
TMEM260-203ENST00000539559 RBMS1P29558 406 aaKnown RBP18.87■□□□□ 0.61
TMEM260-203ENST00000539559 CRYZQ08257 329 aaKnown RBP18.87■□□□□ 0.61
TMEM260-203ENST00000539559 DHCR24Q15392 516 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 MLF2Q15773 248 aaPredicted RBP18.87■□□□□ 0.61
TMEM260-203ENST00000539559 DECR1Q16698 335 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 ZNF782Q6ZMW2 699 aaPredicted RBP18.87■□□□□ 0.61
TMEM260-203ENST00000539559 ABHD4Q8TB40 342 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 LRIG1Q96JA1 1093 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 TRAF4Q9BUZ4 470 aaPredicted RBP18.87■□□□□ 0.61
TMEM260-203ENST00000539559 DPP7Q9UHL4 492 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 ZMIZ1Q9ULJ6 1067 aa18.87■□□□□ 0.61
TMEM260-203ENST00000539559 MDC1Q14676 2089 aaKnown RBP18.86■□□□□ 0.61
TMEM260-203ENST00000539559 NPIPA5A0A0B4J1W7 369 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 NPIPA7E9PJI5 369 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 HRGP04196 525 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 NPIPA8P0DM63 369 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 EXOSC2Q13868 293 aaKnown RBP18.86■□□□□ 0.61
TMEM260-203ENST00000539559 ANGPT1Q15389 498 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 THSD4Q6ZMP0 1018 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 OR4N5Q8IXE1 308 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 SHISA5Q8N114 240 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 PIAS4Q8N2W9 510 aaPredicted RBP18.86■□□□□ 0.61
TMEM260-203ENST00000539559 OR2A1Q8NGT9 310 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 PIGKQ92643 395 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 YIPF5Q969M3 257 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 MS4A6EQ96DS6 147 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 ELP4Q96EB1 424 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 GSDMCQ9BYG8 508 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 PRDM7Q9NQW5 492 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 FLVCR2Q9UPI3 526 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 PLEKHM1Q9Y4G2 1056 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 PRNPP04156 253 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 TPOP07202 933 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 CISD3P0C7P0 127 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 GNA13Q14344 377 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 ADGRD2Q7Z7M1 963 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 GANCQ8TET4 914 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 GIMAP1Q8WWP7 306 aa18.86■□□□□ 0.61
TMEM260-203ENST00000539559 KISS1RQ969F8 398 aaPredicted RBP18.86■□□□□ 0.61
TMEM260-203ENST00000539559 ORAI1Q96D31 301 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms