RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 GKN3PP0CG01 181 aa14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 PSKH1P11801 424 aa14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 IFI30P13284 250 aa14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 MAKP20794 623 aa14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 ALAS2P22557 587 aa14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 MADCAM1Q13477 382 aa14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 GALEQ14376 348 aa14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 SF3A2Q15428 464 aaKnown RBP14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 FIGLAQ6QHK4 219 aa14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 SMARCD3Q6STE5 483 aa14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 B3GLCTQ6Y288 498 aa14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 UTS2BQ765I0 119 aa14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 TRIM48Q8IWZ4 208 aa14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 UBASH3BQ8TF42 649 aa14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 PTP4A1Q93096 173 aa14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 ENKD1Q9H0I2 346 aa14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 ADAP2Q9NPF8 381 aa14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 TRIM36Q9NQ86 728 aa14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 CMC2Q9NRP2 79 aa14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 TMEM5Q9Y2B1 443 aa14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 TRBV23OR9-2A0A075B6M9 112 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 FAM240BA0A1B0GVZ2 78 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 DAPL1A0PJW8 107 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 SLC22A31A6NKX4 558 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 TRIM3O75382 744 aaPredicted RBP14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 LYPD3O95274 346 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 FAM157BP0CG42 384 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 UGT2B7P16662 529 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 ACTR1BP42025 376 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 ACTR1AP61163 376 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 PPP2CBP62714 309 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 PPP2CAP67775 309 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 FOXK2Q01167 660 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 ADAM15Q13444 863 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 NFATC4Q14934 902 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 TATDN3Q17R31 274 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 FCRL6Q6DN72 434 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 COX18Q8N8Q8 333 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 BPIFA2Q96DR5 249 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 RNF170Q96K19 258 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 TEAD3Q99594 435 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 TTYH2Q9BSA4 534 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 B3GAT2Q9NPZ5 323 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 MALT1Q9UDY8 824 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 KCNE5Q9UJ90 142 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 KLHL21Q9UJP4 597 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 FBXL21Q9UKT6 434 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 SCML1Q9UN30 329 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 SPACA6W5XKT8 324 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 AK1P00568 194 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 BMP8BP34820 402 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 TRAM1Q15629 374 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 GARNL3Q5VVW2 1013 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 TRILQ7L0X0 811 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 BMP8AQ7Z5Y6 402 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 GPALPP1Q8IXQ4 340 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 SLC37A3Q8NCC5 494 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 OR5W2Q8NH69 310 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 PFN4Q8NHR9 129 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 CCL4L1Q8NHW4 92 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 FGF14Q92915 247 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 KCTD12Q96CX2 325 aaKnown RBP14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 WDR92Q96MX6 357 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 FYTTD1Q96QD9 318 aaKnown RBP14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 MARVELD1Q9BSK0 173 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 MED20Q9H944 212 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 ATP13A2Q9NQ11 1180 aa14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 PAQR5Q9NXK6 330 aaPredicted RBP14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 SIRT4Q9Y6E7 314 aaPredicted RBP14.87□□□□□ -0.03
CHMP1A-202ENST00000535997 PRR23D1E9PI22 279 aaPredicted RBP14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 PEX12O00623 359 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 PLPP2O43688 288 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 APBB3O95704 486 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 GPR75O95800 540 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 PRR23D2P0DMB1 279 aaPredicted RBP14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 PTNP21246 168 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 MAP3K8P41279 467 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 INPP1P49441 399 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 CTBP2P56545 445 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 TCEA2Q15560 299 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 TIGD3Q6B0B8 471 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 HBMQ6B0K9 141 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 PARM1Q6UWI2 310 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 TCTE3Q8IZS6 198 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 KISS1RQ969F8 398 aaPredicted RBP14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 TSACCQ96A04 125 aaPredicted RBP14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 SCN2AQ99250 2005 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 TMEM246Q9BRR3 403 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 CERS4Q9HA82 394 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 FBXO34Q9NWN3 711 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 SIGLEC7Q9Y286 467 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 MED31Q9Y3C7 131 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 F5P12259 2224 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 LOC105369274A0A096LPK9 316 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 LOC102723532A0A0G2JNH3 316 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 A6NCN8 305 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 LRRC72A6NJI9 287 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 FAM25AB3EWG3 89 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 FAM25CB3EWG5 89 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 FAM25GB3EWG6 89 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms